Vicugna pacos (alpaca): 102540115
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Entry
102540115 CDS
T08098
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102540115 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102540115 (POU5F1)
03021 Transcription machinery [BR:
vpc03021
]
102540115 (POU5F1)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102540115 (POU5F1)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
102540115 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
Motif
Other DBs
NCBI-GeneID:
102540115
NCBI-ProteinID:
XP_006215371
UniProt:
A0A6I9ILN0
LinkDB
All DBs
Position
20
AA seq
360 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWLSFQGPPGGSGIGPGVGPGAEVWGL
PPCPPPYDFCGGMAYCGPQVGVGLVPQGGLETPQPEAEAGAGVESNSEGASPEPCAAPAG
AVKLDKEKQEPTPEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLESMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYSQREDFEA
AGSPFSGGPVSFPLAPGPHFSTPGYGGPHFTTLYSPVPFPEGEAFPSVSVTTLGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctggcttccgacttcgccttctcgccaccaccgggcggtggaggcgat
gggccaggagggccagagccgggctgggttgatcctcggacctggctgagcttccaaggg
cctcccggtgggtcaggaatcgggccgggggttgggccgggggccgaggtgtgggggctt
cccccgtgtcccccgccctatgacttctgcggagggatggcctactgtggacctcaggtc
ggtgtggggctggtgccccaaggcggcctggagacccctcagcccgaggccgaggcggga
gccggggtggagagcaactccgagggggcctccccggagccctgcgccgccccggctggc
gccgtgaagctggacaaggagaagcaggagccaacccccgaggagtcccaggacatcaaa
gctcttcagaaagacctggaacaatttgccaagctcctgaagcagaagaggatcaccctg
ggatatacccaggccgatgtggggctcaccctaggggttctctttgggaaagtgttcagc
caaacgaccatctgccgttttgaggctctgcagctcagtttcaagaacatgtgtaagctg
cggcccctgctgcagaagtgggtggaggaagctgacaacaacgagaatctacaggagata
tgcaaagcagagacccttgtgcaggcccggaagagaaagaggactagtatcgagaaccga
gtgagaggcaacctggagagcatgttcctgcagtgcccaaaacctaccctgcagcagatc
agccacatcgcccagcagctcgggcttgagaaggatgtggtccgagtgtggttctgcaac
cgtcgccagaagggcaaacgatcaagcagtgactattcgcaacgagaggattttgaggct
gctgggtctcctttctcagggggaccagtatcctttcctctggcaccagggccccacttt
agtaccccgggctacgggggccctcacttcaccacactgtactccccggtcccattccct
gagggtgaggcctttccctcggtgtctgtcaccactctgggctctcccatgcattcaaac
tga
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