KEGG   Vicugna pacos (alpaca): 102540301
Entry
102540301         CDS       T08098                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03320  PPAR signaling pathway
vpc04148  Efferocytosis
vpc04151  PI3K-Akt signaling pathway
vpc04659  Th17 cell differentiation
vpc04919  Thyroid hormone signaling pathway
vpc04920  Adipocytokine signaling pathway
vpc04928  Parathyroid hormone synthesis, secretion and action
vpc04932  Non-alcoholic fatty liver disease
vpc04976  Bile secretion
vpc05160  Hepatitis C
vpc05200  Pathways in cancer
vpc05202  Transcriptional misregulation in cancer
vpc05207  Chemical carcinogenesis - receptor activation
vpc05216  Thyroid cancer
vpc05222  Small cell lung cancer
vpc05223  Non-small cell lung cancer
vpc05226  Gastric cancer
vpc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102540301 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102540301 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    102540301 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102540301 (RXRA)
   03320 PPAR signaling pathway
    102540301 (RXRA)
   04919 Thyroid hormone signaling pathway
    102540301 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    102540301 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    102540301 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102540301 (RXRA)
   05202 Transcriptional misregulation in cancer
    102540301 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    102540301 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    102540301 (RXRA)
   05216 Thyroid cancer
    102540301 (RXRA)
   05222 Small cell lung cancer
    102540301 (RXRA)
   05223 Non-small cell lung cancer
    102540301 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    102540301 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102540301 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    102540301 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpc03000]
    102540301 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:vpc03310]
    102540301 (RXRA)
Transcription factors [BR:vpc03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    102540301 (RXRA)
Nuclear receptors [BR:vpc03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   102540301 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 102540301
NCBI-ProteinID: XP_031529581
UniProt: A0A6J3AA11
LinkDB
Position
Unknown
AA seq 367 aa
MAAPSLHPSLGPGIGSSLGAPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMAQREAVQEERQRGKDR
GENEVESTSSANEDMPVEKILEAELAVEPKTETYVEANVGLNPSSPNDPVTNICQAADKQ
LFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRN
SAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREK
VYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML
EAPHQMT
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggctgctccctcgctgcacccctccctggggcctggcatcggctcctcgctcggcgca
ccggggcagctgcactcgcccatcagcaccctgagctcccccatcaacggcatgggccca
cccttctccgtcatcagctcccccatgggcccccactccatgtcggtgcccaccacaccc
accctgggcttcggcactggaagcccgcagctcagctcccccatgaaccccgtcagcagc
agcgaggacataaagcccccgctgggcctcaacggtgtcctcaaagtcccggcccacccc
tcagggaacatggcgcagcgggaggccgtgcaggaggagcggcagcggggcaaggaccgg
ggggagaacgaggtggagtccacgagcagcgccaacgaggacatgccggtggagaagatc
ctggaggccgagctggccgtggagcccaagaccgagacgtatgtggaggcgaatgtgggg
ctgaaccccagctcgcccaacgaccccgtcaccaacatttgccaagcggcggacaagcag
ctgttcaccttggtggagtgggccaagcggatcccgcacttctccgagctgcccctggac
gaccaggtcatcctgctgagggcaggctggaacgagctgctcatcgcatccttctcccac
cgctccatagccgtgaaggacggtatcctcctggccaccgggctgcacgtccaccgcaac
agcgcccacagcgcgggcgtgggcgccatctttgacagggtgctgacggagcttgtgtcc
aagatgcgggacatgcagatggacaagacggagctgggctgcctgcgcgccatcgtcctc
ttcaaccccgactccaaggggctctcgaacccggccgaggtggaggcgctccgtgagaag
gtctacgcgtccctggaggcgtactgcaaacacaagtacccggagcagccgggaaggttt
gccaagctcctgctgcgcctgccggccctgcgctccatcggcctcaagtgcctggaacat
ctcttcttcttcaaactcattggggacacgcccatcgacaccttcctcatggagatgctg
gaagccccgcaccaaatgacttag

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