Vicugna pacos (alpaca): 102540304
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Entry
102540304 CDS
T08098
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04142
Lysosome
vpc04144
Endocytosis
vpc04721
Synaptic vesicle cycle
vpc04961
Endocrine and other factor-regulated calcium reabsorption
vpc05016
Huntington disease
vpc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102540304 (CLTC)
04142 Lysosome
102540304 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
102540304 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
102540304 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102540304 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
102540304 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102540304 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpc04147
]
102540304 (CLTC)
Membrane trafficking [BR:
vpc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102540304 (CLTC)
Exosome [BR:
vpc04147
]
Exosomal proteins
Proteins found in most exosomes
102540304 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
102540304
NCBI-ProteinID:
XP_006218062
UniProt:
A0A6I9ISW2
LinkDB
All DBs
Position
16
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtata
aatccagcaaacattggcttcagtaccctgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaagcccaggtggtaattattgacatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagctagcaaagtaatt
gcactgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgacgtcactttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcactggagtatggaaggagagtctcagccagtgaaa
atgttcgaccgccattctagccttgcaggatgccagatcatcaattaccgtacagatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagttatattctgtagataggaaagtgtctcagcccattgaagggcatgccgccagc
ttcgcacagtttaagatggaaggaaatgcagaagagtcaacgctgttttgttttgcagta
cggggtcaagctggagggaagttacatatcattgaagttggcacaccacctacagggaac
cagccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtagtatttttgattactaagtatggt
tatatccacctctatgatcttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacaatctttgttactgcacctcatgaagccacagctggaataattggagtaaacaga
aaaggacaagttctctcagtatgcgtggaagaagaaaacataattccttatatcaccaat
gttctacaaaatcctgatttggctctgagaatggctgtccgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattattcagaggca
gcaaaagtggctgctaatgcaccaaagggaatccttcgtaccccagacaccatacgtcgg
ttccagagcgtcccagcccaaccaggtcaaacttctcctctgcttcaatacttcggaatc
cttttggaccagggccagctaaacaaatacgaatccttagaactgtgtaggcctgtactt
cagcaagggcggaaacagcttttggagaaatggttaaaagaagataagctggaatgctct
gaagaactgggagaccttgtgaaatctgtggaccctacactggcactcagtgtgtaccta
agggctaatgtcccaaataaggtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttgtatgctaaaaaagttggatatactccagactggatctttctgctgagaaat
gtcatgcgtatcagtccagatcagggacagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcacacagattgtggacgtgtttatggaatacaatctaattcag
cagtgtactgcattcttacttgatgccctgaagaataaccggccatcggaaggtccttta
cagacacgattgcttgagatgaaccttatgcatgcacctcaagtcgcagatgctattcta
ggaaatcagatgttcacacattatgaccgggctcatatcgctcagctgtgtgaaaaggct
ggcctcctacagcgtgcattagaacacttcactgatttgtatgatataaagcgtgcggtt
gttcacacccatcttcttaaccctgagtggttagtaaattactttgggtccttatcagta
gaagactccctcgaatgcctcagggccatgctgtcggctaatattcgtcagaatctacag
atttgtgttcaagtggcttcaaagtatcacgaacagctgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtcttttttattttctgggatccattgttaac
tttagtcaggacccagacgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcgaagctaacagatcagttaccacttatcattgtatgtgatcga
tttgactttgtccacgatttggtgctctatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggttattggaggattgctt
gatgttgattgctctgaagatgtcatcaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcca
tggctagaggcaagaatccatgagggctgtgaagagcctgctactcacaatgcattagcc
aaaatctacatagacagtaataacaacccagagagatttcttcgtgaaaatccttattat
gacagtcgtgttgttgggaagtactgtgagaagagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgacctggaacttattaatgtttgcaatgagaattccctcttc
aagagtctttcccgctatctggtacgccgaaaggatccagaattatggggtagtgtgctg
ttggaaagcaatccttacaggagacccctaattgaccaggttgtacagacagccttgtct
gaaactcaggaccctgaagaagtgtcagtaactgtcaaggcattcatgactgcagacctt
cctaatgaactcattgagctgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacccgggtt
atggaatatattaaccgcctggataattacgatgccccagatattgccaatatcgccatc
agcaatgagctgtttgaagaagcatttgccatttttcggaaatttgatgttaatacctca
gcagtgcaggtcttaattgaacatattggaaacttggatcgggcatatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcagcttgcaaaagctcagctgcagaagggcatg
gtgaaagaagctattgattcgtatatcaaagctgatgatccttcatcctacatggaagtt
gttcaggctgccaatactagcggaaactgggaagaactggtaaaatacttgcagatggcc
cgtaagaaggctcgagagtcctacgtggagacagaattgatttttgcgctggctaaaaca
aaccgccttgcagagttagaagaattcatcaatgggccaaataatgctcatatccaacaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagctgttgtacaataac
gtttccaattttggacgcttggcatctactttggttcatctgggtgaatatcaggcagct
gttgatggagccaggaaagctaacagtactcgaacatggaaagaggtctgcttcgcctgt
gtcgatgggaaggagttccgtcttgctcagatgtgtgggcttcatattgttgtacatgcc
gatgaattggaggaactcatcaactactatcaggatcgtggatattttgaagaactgata
accatgttggaagcagcactgggacttgagcgagctcatatggggatgtttaccgaatta
gctattctatattctaaatttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ttggtgtttttgtatgacaagtatgaagaatatgataatgctataattaccatgatgaat
catcccactgatgcatggaaagaagggcagttcaaagatatcattaccaaggttgccaat
gtggaactgtactacagagcaatacaattctacttagaattcaagcccctgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgcgcggtcaattatttcagc
aaggtaaaacagttaccactggtgaaaccgtatttgcgttcagttcagaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcgcttgctcagcgtttggaa
aaacatgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtggaactgtgcaagaaagatagcctatacaaggatgcaatgcagtat
gcttctgaatctaaagatactgagttggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagaatgctttggagcttgtctctttacctgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatcatggattttgcgatgccctatttcatc
caggtcatgaaggaatacctgacaaaggtggataaattagatgcttcagaatcattgaga
aaagaagaagagcaagctacagagacacaacctattgtttatggtcagccccagttgatg
ctgacagcaggacccagtgttgcagtccctccccaggcaccttttggttatggttatact
gcaccaccctatgggcagccacagcctggctttgggtacagcatgtga
DBGET
integrated database retrieval system
