Vicugna pacos (alpaca): 102540324
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Entry
102540324 CDS
T08098
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
102540324 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102540324 (PRDM4)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102540324 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
102540324
NCBI-ProteinID:
XP_006205923
UniProt:
A0A6I9I818
LinkDB
All DBs
Position
12
AA seq
801 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYALPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIANNPSALDPYQSNGNVGLEPGIVSIDSRSVTTHGAQSLHP
SDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHTQIPNGSRSHEPLSVDSV
SNNLAAETVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPE
HPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPSQGHSSSHGPSHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEDSEEEELADSVG
TEDCRINSAVYSADESLSTHK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgacttca
tcctctgtgagcaatgccctgccagtctcagggagtcaccttgggttggctgcctcaccc
actcacaatgccatccctgccccaggcctgccagtggcaattccaaacctgggtccctcc
ctgagctctctgccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgagagaaactatgccctacctccaccaccttacccccacctt
gagagcagttacttcagaaccattctacctggcattttatcttatttagccgacagacca
cctcctcagtatatccaccctaactctataaatgttgatggtaatacagcattatctatc
gccaataacccttcagcactagatccctatcagtccaatggaaatgttggtttagaacca
ggcattgtttcaatagactctcgatctgtgacaacacatggtgcccaaagtcttcatccc
agtgatggccatgaggtggccttggatacaacaatcactatggagaacgtctctagggtt
accagcccaatctctacagatggaatggcagaagagcttaccatggatggtgttgcagga
gagcatacccaaattccaaatggctccagaagtcatgaacctctgtctgtggattctgtg
agcaacaaccttgcagcagaaactgtaggacatggtggagtgatacccattcatgggaat
ggactggagctccctgtggtcatggagacagaccacattgcaagtcgggtcaacgggatg
tctgacagtgccctcagtgactccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatctgtttccctccatgaagtt
ggcctaagcctagaacctgtggctgtctcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtatcttcagacagtctttcttttgtaccaccttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaaccttgtttacaatttggtgcactctctgt
gaccgagcctatccttcagactgccccgatcacggaccagtgacttttgttcctgacaca
ccaatagagagcagagcgagactttctctcccgaagcagcttgttctccgccagtcaatt
gtgggagcagaagttggtgtctggactggggaaaccattcctgtgcggacgtgctttggg
cctctcattggccagcagagtcactccatggaagtagcagaatggacagataaggcagtg
aaccatatctggaagatataccacaatggtgtcctagaattctgcatcattacaactgat
gaaaatgaatgtaattggatgatgtttgtgcgcaaagccaggaatcgggaagaacagaat
ttggtggcttatccccatgatggaaaaatctatttctgcacctcacaagatatccctcct
gaaaatgaactgcttttttattacagccgggattatgctcagcagattggtgttcccgaa
cacccagatgtgcacctctgtaactgtggcaaggagtgcaattcctatacagagttcaaa
gcccacctgaccagccacatccataaccatcttcctagccagggccacagcagcagccat
gggccaagccacagcaaagaaaggaagtggaagtgctccatgtgcccccaagcttttatc
tccccttccaaacttcatgtccactttatgggtcacatgggtatgaagccccacaagtgt
gatttctgtagcaaggcttttagtgatcccagcaacctgcgtactcacctcaagatacac
acaggtcagaagaactacaggtgtactttgtgtgacaagtctttcacccagaaggctcac
ctggagtcccacatggttatccacacgggtgagaagaatctcaagtgtgattactgtgac
aagctgttcatgcggaggcaggacctcaagcagcacgtgctcatccacacacaagaacgc
cagatcaagtgtcccaagtgtgataagctgttcttgagaacaaatcacttaaagaaacat
ctcaattcacatgaaggaaaacgggattatgtctgtgaaaaatgtacaaaggcttatcta
accaaatatcatctcacccgccacctgaagacctgcaaagggcccacctccagttcatca
gcacaggaggaggaggaggaagaggactcagaggaggaagaactagcagactctgtgggg
acagaagactgtcggattaacagtgctgtgtattcagcagatgaatctctctctacacat
aaatag
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