Vicugna pacos (alpaca): 102540460
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Entry
102540460 CDS
T08098
Symbol
VCL
Name
(RefSeq) vinculin isoform X3
KO
K05700
vinculin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04510
Focal adhesion
vpc04520
Adherens junction
vpc04670
Leukocyte transendothelial migration
vpc04810
Regulation of actin cytoskeleton
vpc04820
Cytoskeleton in muscle cells
vpc05100
Bacterial invasion of epithelial cells
vpc05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102540460 (VCL)
04520 Adherens junction
102540460 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102540460 (VCL)
04810 Regulation of actin cytoskeleton
102540460 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102540460 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102540460 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
102540460 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vpc04812
]
102540460 (VCL)
04147 Exosome [BR:
vpc04147
]
102540460 (VCL)
Cytoskeleton proteins [BR:
vpc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102540460 (VCL)
Exosome [BR:
vpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102540460 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
102540460
NCBI-ProteinID:
XP_015107195
UniProt:
A0A6J0B535
LinkDB
All DBs
Position
11
AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASLVAMQKAQQVSQG
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVE
GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEHLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacacgcacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
actgcgcctgtggccgccgtgcaagcggccgtcagcaacctcgttcgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagatccttac
tccgtgcctgctcgggattacctgattgacgggtcaaggggcatcctctccggcacatcg
gacctgctcctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacttat
acgaagaaccttggaccaggaatgacaaagatggccaagatgattgacgagagacagcag
gaactgactcaccaggagcaccgagtgatgttggtgaattcaatgaacaccgtgaaagag
ttgctacctgttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtagaaaagatgagcgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggacgaagatgcctgggccagc
aagaaggacactgaagccatgaagagagcactggcctcaatagactccaaattgaaccag
gccaaaggttggctccgtgaccccagcgcctccccaggggatgctggtgagcaggccatc
aggcagatcttagatgaagctggaaaagttggtgaactctgcgcaggcaaagaacgcagg
gagatcctgggaacctgtaagatgctagggcagatgactgatcaagtggctgacctgcga
gccagaggacagggagcctcactggtggccatgcagaaagcccagcaggtgtctcagggt
ctggatgtgctcacagcaaaagtggaaaacgcagcccgcaagctggaagccatgaccaac
tcaaagcagagcatcgcgaagaagatcgatgctgctcagaattggcttgccgatccaaat
ggtggaccagaaggagaagaacagattcgaggggctttggctgaagctcggaaaatagct
gaattatgtgatgatcctaaagagagagatgacattctccgttctctgggagaaatatct
gctctgacgtctaaattagcagatctacgaagacagggaaaaggggattcgccagaggcc
cgagcactggccaaacaagtggccacagccctgcagaatttgcagaccaaaaccaacagg
gctgtggccaacagcagacccgccaaagcagctgtccaccttgagggcaagattgaacaa
gcacagcggtggattgataatcccacagtggatgaccggggagttggtcaggctgccatc
cgggggctcgtggccgaagggcatcgtctggctaatgtcatgatggggccttatcgccaa
gatcttctggcaaagtgtgaccgtgttgaccagctgacagcgcagctggctgacctggct
gcccgaggggaaggggagagtcctcaggccagagcacttgcatctcagctccaagactcc
ttaaaggatctgaaagcccggatgcaggaggccatgactcaggaggtgtcagatgttttc
agtgataccacaactcccatcaagctgttggcggtggcagccactgcccctcctgatgca
cccaatagggaagaggtattcgatgagagggcagctaactttgaaaaccattcaggaagg
cttggtgccacggccgagaaggcggctgctgttggaactgccaataaatcaacggtggaa
gggattcaggcctccgtgaagacagcccgagaactcacacctcaggtcgtctcagccgct
cgcatcttacttaggaatcctggaaaccaagctgcttatgaacatttcgaaaccatgaag
aaccagtggatcgataatgttgaaaaaatgacagggctggtggacgaagccattgatacc
aaatctctgttggatgcttccgaagaagcaattaaaaaagacctggacaagtgtaaagta
gccatggccaacattcagcctcagatgctagtcgctggggcaaccagcattgctcgtcgg
gccaaccggatcctgctggtggctaagagggaggtggagaactctgaggaccccaagttc
cgtgaggctgtgaaagctgcttctgacgaattgagcaaaaccatctccccaatggtgatg
gatgcaaaggctgtggcaggaaacatttctgaccctggcctgcaaaagagcttcctggac
tcaggataccggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggag
cctgactttccacctcctccgccagatcttgaacacctccgactgacagatgagcttgct
cctcccaaaccgcctctgcctgagggtgaggtccctccgccccggcccccaccaccagag
gagaaggatgaagagttccctgagcagaaagccggagaggtgattaaccagccaatgatg
atggctgccaggcaactgcatgatgaagctcgcaaatggtccagcaagggtaatgacatc
attgcagcagccaagcgcatggctctgctgatggctgagatgtctcggctggtcagagga
ggcagtggtaccaagcgggcactgattcaatgtgccaaggacatcgccaaggcctcagat
gaggtgactcggttggccaaggaggttgccaagcagtgcacagataagcggattagaacc
aacctgttacaggtatgcgagcgaatcccaaccataagcacccagctcaaaatcctgtcc
acggtgaaggccaccatgctgggccgcaccaacatcagtgacgaggagtctgagcaggcc
acagagatgctggttcacaatgcccagaatctcatgcagtctgtgaaggagactgttcga
gaagcagaagcagcttcaatcaagattcgaacagatgctggatttacactgcgctgggtc
agaaagactccctggtaccagtag
DBGET
integrated database retrieval system
