Vicugna pacos (alpaca): 102540490
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Entry
102540490 CDS
T08098
Symbol
XPC
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102540490 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102540490 (XPC)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102540490 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
DUF7149
Motif
Other DBs
NCBI-GeneID:
102540490
NCBI-ProteinID:
XP_031542022
UniProt:
A0A6J3B9U1
LinkDB
All DBs
Position
17
AA seq
799 aa
AA seq
DB search
MTVTSEGPKVVKDEDLSDGQDSRGFPSARKKARRPRKEAAVDRGGCEADDEEESEDDWEE
VEELGEPGPGDLGENTAFSESALPVKPVEIEIETPEQVKARERSEKLKMEFETHLRRLMK
RFSKEVHEDTHKVHLLCLLANGFYRNSICNQPDLRAIGLSITPVRFTRVPPQDVDTGYLS
NLVKWFIGTFTINEDLSTSEQDDLQTTLERRFAIYSAKNAEELVHIFLLILRALHLPTRL
VLSLQPIPLKLPAAKGKKPSKERAAEGPGASSEXXXXXXXXRRVASRVSYKEESGSGGAS
SSSDFELSSGDSLLPSDEDSEPGLPKPRRAPAPPRTERGSRRDVRRDSEPPRGSRPKPPG
SPAASASASGRKRGKGKKASPGEEAAGVDQWLEVFCEREDKWVCVDCVHGVVGQPLICYQ
YASKPVTYVVGIDGDGWVRDVTQRYDPAWLTATRRCRVDAAWWAEALRPYRSPLAERERK
EDMEFQAKHLDQPLPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDC
VHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRARRARLAEPQLQDQNDLGLFGRWQTEE
YQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCIQLNLPNLHRVARKLGIDCAQAVTGFDFH
KGYSHPITDGYIVCEEYRDVLLTAWENEQALVEKKEKEKREKRALGNWKLLVRGLLIRER
LQLRYGAQSTAAAPHADAGGGLSSDEEEGTSSQAEAARILAASWPQNREAEEERKGRRLR
KSSREKKEAESHLFPFEKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcacatctgaaggccccaaggtcgtaaaggacgaagacctcagtgatgggcag
gattccaggggcttcccaagtgcccgcaagaaggctcggcgtcccaggaaagaggctgcc
gtggaccgaggtggctgcgaggcagatgacgaggaggagagtgaagatgactgggaggag
gtggaagaacttggtgagcctgggccaggcgacctgggagaaaacacagccttctctgaa
tccgctctgcctgtgaagccagtggagatagaaattgaaacaccggagcaagtgaaagca
agggaaaggagtgaaaagctgaaaatggaatttgagacgcatcttcggaggctgatgaaa
cgtttcagtaaggaggtccacgaagacacacacaaggttcaccttctgtgtctgctggca
aatggcttctataggaacagcatctgcaaccagcccgacctgcgcgccatcggcctctcc
atcacccccgtgcgcttcaccagagtgccgcctcaggatgtggacacgggctacctgtca
aacctggtgaaatggttcatcggaacatttacaattaatgaggacctttcaaccagtgaa
caagatgacctgcagacgacgttggaaaggagatttgctatttactcggcaaaaaatgct
gaagaactggtccacatatttttactgattctccgggccctgcacctccctacccgactg
gtactgtctctacagccaattcccctgaagttaccagcagcgaagggaaagaaaccttcc
aaggagagggccgcggaggggccgggagcctcctcagaanannnnnnnnnnnnnnnnnnn
nagcggcgggtggcctccagggtgtcttacaaggaggagagcgggagcggcggggccagc
agcagctctgacttcgagctctccagcggggacagcctgctgccctccgacgaggactcc
gagcccggcctcccgaagccaaggagggccccggcgcctccgaggacagagcggggctcc
aggagggatgtcaggagggactccgagcccccgcgaggaagccgcccgaagcccccgggc
tccccagcagcgtctgcgagcgcatcgggcaggaagagagggaaaggcaagaaggccagc
cccggagaggaggcggccggcgtggaccagtggctggaggtgttctgtgagcgggaggac
aagtgggtgtgtgtggactgtgtgcacggggtggtgggccagcctctgatctgttaccag
tacgccagcaaacctgtgacctacgtcgtgggcatcgacggcgatggctgggtccgcgac
gtcacccagcggtatgaccccgcctggctgacagccacccgcaggtgccgggtcgacgcc
gcctggtgggccgaggccctgaggccctaccggagcccgctggccgagagggagcggaag
gaggacatggagtttcaggccaagcacctggaccagcctttgcccaccgtcattggcaca
tataagaaccaccctctgtacgccctgaagaggcatctcctgaagtacgaggccatctac
cccgagacggctgccatccttgggtactgccgcggcgaagccgtctactccagggactgc
gtgcataccctgcactccagggacacgtggctgaaacaggcaagagtggtgcggcttgga
gaggtaccttacaagatggtgaagggctactccaaccgggcccggagagcccgcctggcg
gagccgcagctgcaggaccagaatgacctgggtctgtttggccgctggcagacagaggag
taccagccgcccgtggctgtggacgggaaggtgccccggaacgagtttgggaacgtgtac
ctcttcctgcccagcatgatgcctgtcggctgcatccagctcaacctgcccaacctgcac
cgcgtggcccgcaagctgggtatcgactgcgcccaggccgtcacgggcttcgacttccac
aaaggctactcccaccccataactgatggctacatcgtctgtgaggaatacagagacgtg
ctgctgaccgcctgggagaacgagcaggcgctcgtggagaagaaggagaaggagaaaagg
gagaagcgggcactggggaactggaagctgctggtcagagggctgctcatcagggagcgg
ctgcagcttcgctacggggcccagagcacggcagcggcgccccacgcggacgcgggaggt
gggctctcgtcagacgaggaggaggggaccagctctcaggcggaagcagccaggatcctg
gcggcctcgtggccccagaaccgagaggctgaggaggagcggaaggggaggcgcctcagg
aagagcagcagggagaagaaggaggccgagtcccacctgttcccatttgagaagctgtga
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integrated database retrieval system
