Vicugna pacos (alpaca): 102540519
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Entry
102540519 CDS
T08098
Symbol
TOP3A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03440
Homologous recombination
vpc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102540519 (TOP3A)
03460 Fanconi anemia pathway
102540519 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpc03032
]
102540519 (TOP3A)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102540519 (TOP3A)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102540519 (TOP3A)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Topoisomerases
102540519 (TOP3A)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102540519 (TOP3A)
FA (Fanconi anemia) pathway
102540519 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
102540519
NCBI-ProteinID:
XP_031541823
UniProt:
A0A6J3B7W3
LinkDB
All DBs
Position
16
AA seq
956 aa
AA seq
DB search
MLWCVSLLHSFSGPNNTPSDREHMCLSVLHLGWPRLLAVREGLSRFNKIYEFDYHLYGQN
VTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAGIEKYCPENFVDIKKTLERETRQCQ
ALVIWTDCDREGENIGFEIIHVCRAVKPGLPVLRARFSEITARAVQVACENLTEPDQRVS
DAVDVRQELDLRIGAAFTRFQTLRLQKIFPAVLAEQLVSYGSCQFPTLGFVVERFKAIQA
FVPETFHKIRVTHDHEDGTVEFSWKRHRLFNHTACLVLYQLCMEDPRATVVEVRSKAKSK
WRPQALDTVELEKLASRKLRINAKETMRIAERLYTQGYISYPRTETNIFPKDLNLTVLVE
QQTPDPRWGAFARNILERGGPTPRNGNKSDQAHPPIHPTKYTDSLQGNEWRLYELIVRHF
LACCSRDAQGQETTVDIDIARERFVAHGLVILARNYLDVYPYDHWSDKTLPVYEQGSRFQ
PSTVELVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTADKRFLP
GHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKCAVLQQQVQKYKQVFIEAV
AKAEKLDEALSQYFGEAAAAAQQEALYPAVPEPVRKCPQCGKDMVLKTRRGGGFYLSCTG
FPECRSAVWFPDTVLEASRDGSTCPVCQPQPVYRLKLKFKRGSLPPTMPLEFVGCVGGCD
ETLREVLDLRFSRGPPRASQPARQPPGYLQASQALDRTDGNQPSHPQPPGTRPARPSRPL
AGALPSPAAGGDSNSVTCNCGQEALLLTVRKEGPNQGRQFYKCGSGGCSFFLWADSGRPD
AGGPPSLAPRPWGGPGNPXGTLGDSGGGTSCLCSQPAVTRTVQKDGPNRWVDENVAPGTL
GGPTWSGGGGRTQGPEARSKRARAGSSDAGSVAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtgtgtatcattacttcattctttttcagggccgaataataccccgtcggat
agagagcatatgtgtttatccgttcttcacttgggttggccccgccttttggctgttagg
gaaggactttctagattcaacaagatctatgagtttgattatcacctgtatggccagaac
gttaccatggtaatgacttccgtttctggacatctgctggcccacgatttccagatgcag
tttcgtaaatggcagagctgcaatcctcttgtcctctttgaagcaggaattgagaagtac
tgtccggagaactttgtagacatcaagaaaactctagagcgagagacccggcagtgccag
gccctagtgatctggaccgactgtgaccgagaaggagaaaacatcggctttgagattatc
cacgtgtgcagggccgtgaagcccggcctgccggtgctgcgagcacgtttctccgagatc
accgcccgcgctgtccaggtggcctgcgagaacctgacggagcccgaccagagagtcagc
gacgccgtggacgtgaggcaggagctggacctgcggatcggggccgccttcaccaggttc
cagaccctgcggctgcagaagattttccccgcggtgttggcggaacaactggtcagttat
ggcagctgccagttccccaccctgggcttcgtggtggagaggttcaaagccatccaggcg
ttcgtgccagaaaccttccacaagattagagtgactcacgaccatgaggacgggacggtg
gagttcagctggaagaggcaccgtctctttaaccacacggcgtgtctcgtcctctatcag
ctgtgcatggaggatcccagggcgaccgtggtggaggtcaggtccaaggcaaagagcaag
tggaggcctcaagctctggacactgtggagcttgagaagctggcttctcggaagttgagg
ataaatgctaaggaaaccatgaggattgctgaaaggctctacactcaggggtacatcagc
tatccccgaactgaaacaaacattttccccaaagacttaaacttgactgtgctggtggag
cagcagaccccggatccgcgctggggggcctttgcccggaacattctagagcggggtggc
cccaccccacgcaatgggaacaagtctgaccaagctcaccctcccatccaccccaccaag
tacacggacagcttgcagggcaacgagtggcggctgtatgagctcatcgtccgccacttc
ctggcctgctgctcccgggacgcccagggccaggagaccaccgtggacatcgacatcgcg
cgtgagcgcttcgtggcccacggactggtgattctggcccggaactacctggacgtgtac
ccctacgaccactggagcgacaagaccctccccgtctacgagcaaggctctcgctttcag
cccagcaccgtggagctggtggatggggagaccagcccaccgcagctgctcactgaggcc
gacctcattgccctcatggagaagcacggcatcggcacggacgccacgcacgcggagcac
atcgagaccatcaaggcccggatgtacgttgggctcacggcggacaaacgcttcctcccc
gggcacctgggcatggggctcgtggaaggttatgactccatgggctacgagatgtccaag
cctgacctgcgggccgagctggaggctgacctgaagctcatctgtgaggggaagaaggac
aagtgtgctgtcctgcagcagcaggtccagaagtacaagcaggtgttcatcgaggcggtg
gccaaagccgagaagttggatgaggccttgtcccagtacttcggggaagcggcagcggcg
gcccagcaagaagccctgtacccggctgtgccagagcccgtcaggaagtgcccgcagtgc
ggcaaggacatggtcctcaagacccggaggggcggcgggttctacctcagctgcacgggc
ttcccggagtgccggtcggctgtgtggttccccgacaccgtgctggaggccagcagggat
gggagtacgtgtcctgtgtgtcagccgcagcccgtttacaggttgaagttaaagtttaaa
cgtggcagccttcccccgaccatgcctctagagtttgtcggctgcgtcggcggctgtgat
gagaccttgagggaggtcctggacctcaggttttcacgggggccccccagagcctcccag
ccagcccgccagccccccggctacctgcaggcaagccaagccctagacagaacggacggc
aaccagcccagccacccccagcctcccggcaccaggccagccaggccctcaaggcctctg
gccggggccctgccttcgcccgctgctggtggtgacagcaactcggtgacctgcaactgc
ggccaggaggcgctgctgctcactgtgcggaaggaggggcccaaccagggccggcagttc
tacaagtgtggcagcgggggctgcagcttcttcctgtgggccgacagcggccggccagat
gcaggcgggcctccatccttggcgcccaggccctggggcggcccagggaaccccncgggg
actcttggcgacagtggtggcggcacgtcctgcctgtgcagccagccggccgtcacccgc
acggtgcaaaaggatgggcccaacaggtgggtggacgagaacgtggccccagggactttg
ggaggcccaacctggtcaggaggtggaggaagaacccaggggccggaggccagaagcaag
agagcccgggccggttcctcagacgcggggtccgtggccaagaagccccggaagtgcagc
ctttgtcaccagcctgggcacacccgccccttctgtccccagaacagatga
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