Vicugna pacos (alpaca): 102540867
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Entry
102540867 CDS
T08098
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102540867 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102540867 (APEX1)
Enzymes [BR:
vpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102540867 (APEX1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102540867 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102540867
NCBI-ProteinID:
XP_006218191
UniProt:
A0A6I9ISZ7
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGEEPKTEPEAKKSKTGAKKTEKEAAGEGAALYEDPPDQKTSPSGKSA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPPELQELSGLPHQYWS
APSDKEGYSGVGLLSRQCPIKVSYGIGEEEHDQEGRVIVAEFDAFVLVTVYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGF
GELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaagggagcggtggcagaagacggggaagagcccaaaactgaa
ccagaggccaagaagagtaagacgggagcaaaaaaaaccgaaaaagaggcagcgggagag
ggagcagccctgtatgaggaccccccagatcagaaaacctcacccagtggcaaatcagcc
acgctcaagatctgttcctggaatgtggatgggcttcgagcctggattaagaagaaaggt
ttagattgggtaaaggaggaagccccagatatcctgtgcctccaagagaccaaatgttca
gagaacaaactgccacctgaacttcaagagctgtctggactaccccatcagtactggtca
gctccttcagacaaggaagggtacagtggtgtgggcctactctcccgccagtgcccaatc
aaagtctcctatggcattggtgaggaggaacatgatcaagaaggccgagtgattgtggct
gaatttgatgcatttgtgctggtaacagtctatgtacctaatgcaggccgaggcctggta
cgcctggagtaccggcagcgctgggatgaagcctttcgcaaattcctgaagggtctggct
tcccgcaagccccttgtgctttgtggggacctcaatgtggctcatgaagaaattgacctt
cgaaatccaaaggggaacaaaaagaatgctggcttcactccccaagagcgtcaaggcttt
ggggaattgctgcaggctgtgccactggctgacagtttccggcacctctaccctaataca
gcctacgcctacaccttttggacctacatgatgaatgcgcgatccaaaaacgtcggttgg
cgccttgattattttttgttgtctcactctttgttgcctgcattgtgtgacagcaagatc
cgttccaaggctctgggcagtgaccactgtcccatcaccctctacctggcactgtga
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