Vicugna pacos (alpaca): 102541112
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Entry
102541112 CDS
T08098
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102541112 (ZSWIM8)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102541112 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
102541112
NCBI-ProteinID:
XP_031538030
UniProt:
A0A6J3ATU4
LinkDB
All DBs
Position
11
AA seq
1922 aa
AA seq
DB search
WGRRRRSRREAPVAERFVRARSLGDWPRFPFTLRTWARSRPVSLSDLSSSPGTAALSAPA
TPSPGSPLSPGASLSPWPAARAADPRGGXXXXXXXEWEDGERFSFEDSDRFEEDSLCSFI
SEAESLCQNWRGWRKQSAGPNSPTGGGGGGGSGGTRMRDGLVIPLVELSAKQVAFHIPFE
VVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGDQLFRMRAVKDPLQ
IGFHLSATVVPPQMVPPKGAYNVAVMFDRCRVTSCSCTCGAGAKWCTHVVALCLFRIHNA
SAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCG
APDPTAGPSASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAE
WACLLRPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLSYEQITGWWYSVRT
SASHSSASGHTGRSNGQSEVAAHACASMCDEMVTLWRLAVLDPALSPQRRRELCVQLRQW
QLKVIENVKWGQHKKILERLFPGFRPAVEACYFNWEEAYPLPGVTYSATDRKLALCWARA
LPPRPGASRSGGLEESRERPRPLPTEPAVRPKEPGAKRKGLGEGVPSSQRGPRRLSAEGG
EKALHKMGPGGGKAKVLGGAGNGGKGSAGSGNKRRLSSEDSSLEPDLAEMSLDDSSLALG
AEASTFGGFPESPPPCPHPGGSRGPSTFLPEPPDTFEEDGGVYFSEGPEPPTASVCPPGL
LPREICTQDDLPSTDESGNGLPKTKEAGPAVGEEDDDYQAYYLNAQDGAGGEEEKAEGGA
GEEHDLFAGLKPLEQESRMEVLFACAEALHAHGYSNEASRLTVELAQDLLANPPDLKVEP
PPAKGKKNKVSTSRQTWVATNTLTKAAFLLTVLSERPEHHNLAFRVGMFALELQRPPAST
KALEVKLAYQESEVATLLKKIPLGPSEMSTMRCRAEELREGTLCDYRPVLPLMLASFIFD
VLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREK
GDLALALMITYKDDQAKLKKILDKLLDRESQTHKPQTLSSFYSSSRPATASQRSPSKHGG
PSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSPCEGLPSEAALTPR
PEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRG
GWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRRPESHA
PHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGL
YALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDGHLTPPEVASLADRA
SRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGG
GVYPEVLFEVAHQWFWLYEQTAGGSSTAREGATSCNASGIKAAGEAGRGLPEGRGGPGTE
PVTVAAAAVTAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAH
PAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITV
HPYHTEPGLPLPTSVALSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEEAHSQP
VNPHSLHHLHAAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYV
HQFCVGAAKGVLSPFVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHR
LIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTF
SP
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
tgggggaggcggcgccgcagccgccgagaggccccggttgccgagcgcttcgtccgggcc
cggagtctcggagactggccacgattcccgttcacacttcgtacttgggcgaggtcccgt
cccgtatctctttcagacctgagctcctcgcccggcacggcagccctgagcgccccggcc
acccccagccccggctcgccgctcagccccggagcctccctcagcccctggccagcggcc
cgggccgcggatccgcggggggggnnnnnnnnnnnnnnnnnnnnggagtgggaggacgga
gagcgcttctctttcgaggattcggaccgctttgaggaggattcgctctgttccttcatc
tccgaggccgagagcctctgccagaactggcggggatggcgcaaacagtcagcggggccc
aattcccccactggcggcggtggcggaggtggcagtggcggtaccagaatgcgagatgga
ctggtgatcccattggtggagttgtcagcaaagcaggtggcatttcacatcccatttgaa
gtggtggagaaagtttacccgccggtacccgagcagctacagctccgaattgctttttgg
agcttccctgagaatgaagaggatattcgactatattcctgcctggccaacggcagtgca
gatgagttccagcgaggggatcagctgttccgcatgagagctgtgaaggatcccctacag
atagggttccacctgagtgctactgtggtgccacctcagatggtcccccccaaaggggcc
tacaacgtggctgtgatgtttgaccgctgccgggtcacttcctgcagctgcacctgtggg
gctggggccaaatggtgcacccacgtcgtggcactctgtctcttccgcatccacaacgct
tctgcagtctgcctccgggccccagtgtcagagtccttgtcgcggctacagagggaccag
ctgcagaagtttgctcagtacctcatcagtgagctgcctcaacagatcctccccacagcc
cagcgtctcctggatgaactcctctcctcccagtcaacagccatcaatacagtgtgtgga
gccccagaccccacagcagggccctcggcctctgaccagagtacttggtatttggatgag
tcaacactcactgacaacatcaagaagacgctacacaagttctgcggcccctctcctgtg
gtcttcagtgacgtgaactccatgtatctgtcttccacggagcctccggccgctgcagaa
tgggcatgtctgctgcgccctctgaggggccgagagccagagggcgtctggaacttgctc
agcatcgtgcgggagatgttcaagcggagggacagcaatgctgcccccttgttggagatc
ctcactgaccagtgcctctcttacgaacagataacaggttggtggtacagcgtgcgcacc
tcagcctcacacagcagcgccagtgggcacacgggccgtagcaacgggcagtcagaggtg
gcggcccacgcgtgtgccagcatgtgtgacgagatggtcactctgtggaggctggctgtg
ctggaccctgcactcagcccccagcgccgccgggagctgtgtgtgcagctgcgccagtgg
cagctgaaggtgattgagaacgtgaagtggggacagcacaagaagatcctggagcgcctt
ttccctggcttccggccagcagtggaagcctgctacttcaactgggaagaggcctaccca
cttcccggtgttacctacagtgccactgaccggaagctggccctgtgctgggcccgagcc
ctaccccctcggccaggtgcctcccgatctgggggcctggaggaatcccgggagcggccc
cgccctctccccaccgagccagctgtgcggcccaaggagcctggggccaagcgcaaggga
ttgggtgagggcgtcccctcatcacagaggggtccccgccgcctctcagctgagggggga
gaaaaagctctgcataagatgggtccaggtgggggcaaagccaaagtattgggtggggct
ggcaatgggggcaagggctcagcaggcagtgggaacaagcgacggctgagcagtgaggac
agctccttggagccagatctggctgagatgagcctggatgacagcagcctggccctgggc
gcagaggccagcaccttcggtggattccctgagagtccaccaccctgccctcaccctggt
ggctcccgaggcccttctaccttccttcctgaacctccagatacttttgaagaagatggt
ggcgtgtacttctcagaagggcctgagccccccacagcctctgtgtgcccccctggccta
ctgcccagggagatctgtacccaggatgacctcccttccacagatgagagtggcaatggg
ctccctaaaaccaaagaggcaggccctgcagttggagaggaggatgatgactaccaggca
tattatctgaatgcccaggacggggctgggggcgaggaagagaaggctgagggcggggct
ggggaggagcacgacctgtttgccgggctgaagccactggaacaggagagccgcatggag
gtattatttgcctgtgctgaggccttgcatgctcatggctacagcaatgaggcctcccgc
ctcactgtagagcttgcccaagacctgctagccaacccacctgacctcaaggtagagccg
ccccctgccaagggcaagaagaacaaggtgtctacaagccgtcagacgtgggtggctacc
aacaccctgacaaaggcggccttcctgttaacagtgctaagtgagcgcccagagcaccat
aacttggccttccgagtgggcatgtttgccttggagctacagcggcccccagcttctacc
aaggccttggaggtgaaactggcataccaggagtctgaggtggccaccctgctcaagaag
attcctctgggtccaagtgagatgagtaccatgcggtgccgggctgaggagcttcgggag
gggacactctgtgactatcggcctgttttgcctctcatgttggccagtttcatctttgat
gttctctgtactccagtggtttctcccacgggttcccgacctccaagtcgtaactggaac
aacgagatgcctggggatgaggagctgggatttgaagcagcagttgctgccttgggcatg
aagacaacagtgagtgaggcggagcatcccctgctgtgtgaaggcacacgtcgggagaag
ggtgacctggcattggcactgatgatcacttacaaggatgaccaggccaaactcaaaaag
atcttagacaaactcttggaccgagagagccagacacacaaaccacagacactgagttcg
ttctactcatctagccgcccagccacagccagccagaggtctccttcaaaacatgggggc
ccatctgccccaggggccttgcagccgctgacctcaggctctgcagggcctgctcagcca
gggagtgtggcaggggctgggccaggtcccactgagggcttcacagagaagaatgtgcct
gagagttccccacattccccctgtgagggtctcccatctgaggcagctttgaccccaagg
ccagaggggaaagttcccagccgcctggcacttggcagtcgtggaggctacaatggacgg
ggctggggctcaccagggcggcctaagaagaagcacacaggcatggccagcattgacagc
agtgcccctgaaacaacatcagatagctccccaaccttaagccggaggccacttcgaggg
ggctgggcccctacctcctggggtcgaggacaggacagtgacagcatcagcagctcttcc
tcggactcccttggctcctcgtcatccagtggaagtcgccgggccagtgccagtggaggg
gcccgggcgaagacagttgaggttggcaggtacaagggccgccgtcctgagagtcatgcc
ccccatgtacccaatcagccgtcagaggcagctgcacacttctacttcgagctggcgaag
acggtgctgatcaaggcagggggcaacagcagcacttccattttcacacatccatcttcc
tcagggggccaccagggtcctcaccgaaacctgcacctttgcgccttcgagattgggctc
tatgcccttggcctgcacaactttgtttctcccaactggctctcacgtacctattcttcc
cacgtttcctggattacaggccaggcaatggagattggcagtgcagccctaactatactg
gtagaatgctgggatgggcatctgacgccccctgaggttgcatccctggccgacagggca
tcacgggcacgagactccaatatggtgagggcagcggcagagctagccctaagttgtctg
cctcatgcccatgcgttgaaccccaatgagatccagcgggccctggtgcagtgcaaggag
caggataacctgatgttggagaaggcctgcatggcagtggaagaggcagctaagggtggg
ggcgtataccccgaagtgttgtttgaggttgctcaccagtggttctggctatatgagcaa
acagcaggtggctcatccacagcccgtgaaggggctacaagctgtaatgccagtgggatc
aaggcagctggggaggctgggcgggggctgcctgagggcagggggggcccagggactgag
ccggttactgtggcggcagcagcagtgacagcagccacagtggtgccagtcatctcggtg
gggtccagtttatatccgggtccaggactggggcatggtcattcccctggcctgcacccc
tacactgctctacagccccacctgccctgcagccctcaatacctcacccacccagctcac
cccgcccaccccatgcctcacatgccccggcctgccgtcttccctgtgcccagctctgcg
tacccacagggtgtgcatcctgcattcctgggggctcagtacccttactcggtgactccc
ccctcacttgctgccactgctgtgtctttccccgtcccttccatggcacccatcacagta
catccctaccacacagagccagggctcccactgcccaccagtgtggccttgagcagtgtc
catccagcttccacgtttccagccatccagggtgcctcactgcctgccctgaccacacag
cccagccctctggtgagcgggggttttccaccacctgaggaggaggcgcacagtcagcct
gtcaacccgcacagcctccaccacctgcacgcggcctaccgtgttggaatgctggcactg
gagatgctgggtcgccgggcacacaacgatcaccccaacaacttctcccgctcccccccc
tacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagtgaactacgtg
caccagttctgtgtgggggcagccaagggggtgctgagcccgtttgtgctgcaggagatc
gtcatggagacgctgcagcggctgagccccgctcatgcccacaaccacctgcgggccccg
gccttccaccaactggtgcagcgctgccagcaggcatacatgcagtacatccaccaccgc
ttgattcacctgacccccgccgactacgacgactttgtgaatgcgatccggagtgctcgc
agcgccttctgcctgacccccatgggcatgatgcagttcaacgacatcctgcagaacctc
aagcgcagcaaacagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttc
tccccctga
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