Vicugna pacos (alpaca): 102541272
Help
Entry
102541272 CDS
T08098
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102541272 (HELZ)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102541272 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102541272 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PAM2
PhoH
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
102541272
NCBI-ProteinID:
XP_031541482
UniProt:
A0A6J3B9Z5
LinkDB
All DBs
Position
16
AA seq
1946 aa
AA seq
DB search
MEDRRAEKACEQACESLKRQDYEMALKHGTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQTVLCCMQLKGKLQPVSSILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVS
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDHDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKSTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHAGNANKLQQSPPKGKSLHHTQND
HFQNDGVVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQCRNGKSDTNNPGPEINKIRTPEKKPAESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHAL
LNQQQNNLPEQPNQMPPQPNQVVQQQNPLNQLTPQPPPQLSPAYQAGPSSAFFNNAVSHR
PQSPPAEAVIPEQQPPPLLQEGHSPLRAVAQPGPILPSHLNNFTDENPPGLPIGEALDRM
HGSVALETLRQQQVRLQQWNEHHHAYLSQGSIPYPHHHHPHPHLQHLPQPPVGLHPPPVR
ADWKLPSSAEDEAETTDSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPP
AVPSSPSNTDHSTHFSNFNDSSRDVEVANNPAFPQRLPPQMFSSPFSLPSEHLAPPPLKY
LAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQSHQHAVGQEPFHPLSSRT
VSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNQSSF
NFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPSEDHLKSENLEVSSSFN
YNVLQHLGQFPPLMPNKQIAESASSSSQQSSGGSKPAMSYASALRAPPKPRPPPEQAKKS
SDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaaggcatgtgaacaagcgtgtgaatcactcaagaggcag
gactatgaaatggccctcaagcacggcacagaggccctcctttctcttggccagtactcc
atggccgacttcacagggccatgtccactagagatagaaagcatcaaaatcgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactacgggcaagccgatgaagattgt
aggcatgtgctaggagaagggctggccaagggtgatggtgccttccagacagtgctttgc
tgcatgcagcttaaaggcaagctccaacctgtatccagcattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactaaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctctctggatatcacgtggaagacttagaagag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgcatagaaggagta
aaggtagagcataaccctgacctgtcggttactgtcaacaccaaaaagtcgcaccagacg
tggacctttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacagcagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatctggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttttagacaaatcgttgaccaagaccaactatcagtcacggttg
catgaccttctttatattgaggagatagcccaatataaggaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtctct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgatcatgacacacaggttgaacttcagtttcaattaaatcggttacccctc
tgtgaaatgcattatgcgttagacaggatcaaggacaatggggttttgtttccagacatc
actatgactccaaccataccttggagtcccaacaggcaatgggatgagcagttggatcct
cggctaaacgcgaaacagaaggaagctgttctggccattacaactccgctttcaatacag
ctgcctcctgttctcatcatcggaccctatgggacaggcaaaacgttcactctagctcag
gccgtcaagcatatactccagcagcaggaaacgagcaggattctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggtggttgttacgttgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacgcacattctattagatgaggctgcccaggcc
atggagtgtgaaaccattatgcctctagcattagcaactaagagcactcgaattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcacgtttcattacttgatcgactctacgagcattaccctgccgagttcccatgcagg
atcctcctgtgtgagaactaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaactgatggccagtggaaagcaaccagcacacaaggatttctatcca
ctaactttctttacagcaagaggggaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtatttgaagtggtggaacgtgtggaagagttaagaaggaagtggccg
gtagcgtggggcaagttagatgatggcagtatcggtgtggtgactccgtatgcagatcaa
gtgttcaggatacgtgctgagcttcggaaaaagagactatctgatgttaacgttgaaagg
gtgctaaatgttcaaggaaagcagttcagagttttgtttcttagcacagtacgtacaagg
catacttgtaaacataaacagacaccaattaaaaagaaagagcaactgctggaagattcc
acagaggacttagattatggttttttatctaactacaaacttctgaatactgccatcacc
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggagcggtttattgccctgtgtcatgaaaataatagcctacatgga
atcacttttgaacagatcaaagctcagctagaggctttagaactaaagaagacatatgtg
ttgaatccactggcacctgaatttatcccccgggctctacgactgcagcatgcaggaaat
gccaacaaattgcagcaatcaccccccaaggggaagagcctccatcatacccagaatgat
catttccagaatgatggggtcgttcagcccaatccttctgtacttattggcaatcctatt
agagcgtatactcctccaccccctcttggacctcacccaaatttggggaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaatcattacacaccaggcagcgatggcttacaacatgaacctc
ttacagacgcatggacgggggtctcctataccttatggccttggtcatcacccacctgtc
agcatagggcagccacaaaaccagcatcaggagaaggatcagcatgagcaatgtcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaa
aagccggcggaatcaaaacagattgatttggaatcgaatccacagaacagaagtcctgaa
tcacgccctggtgttgtttatcccaataccaaatttcatcgcaaagataatctcaaccca
agacacataaatcttcctcttcctgccccccatgcacagtatgcaattcctaatcgtcat
tttcatccccttcctcagctgccaagaccaccctttccaattccacagcagcacgccttg
ttaaatcagcagcagaataatttgcctgaacagccaaatcaaatgccaccccagccaaat
caggtagtccagcagcagaatccgctgaatcagctgactccgcagccgcctcctcagctt
tctcctgcctaccaggcaggccccagcagcgcttttttcaataatgcagtttctcatcga
ccacagtcccctcctgcagaggctgtcattcctgagcagcagccccctcccctgctgcag
gagggccacagtcctctgcgagctgtcgcgcagcccggccccattcttccttcacatctg
aataacttcactgatgagaaccccccgggactgcctataggggaggctctagatcgtatg
catggaagtgtagctctggaaacgttaaggcagcagcaagtgcggttacagcagtggaat
gagcatcatcatgcctatctcagtcagggcagcattccttacccacaccatcaccaccct
caccctcacctccagcatcttccccagccgcccgttggattacatccgccaccagtgaga
gcagactggaagctccccagcagtgctgaagatgaagcagaaacaacagactcaaggttt
caagacttaatcagagaactgtctaatcgtgatcaaagtgaaacacgggaactagctgaa
atgccaccacctcaatcgagacttttgcaatatagacaaattcagactaggagcccacca
gcagtcccatcttccccgtctaatacagaccacagtacccacttttctaactttaatgac
agcagcagagacgttgaagtagccaacaacccagcatttccacagcgcctgccgccccag
atgttcagctcacctttctcgttgccatctgaacaccttgcccctcctcccttgaaatac
ctggcacctgatggagcatggacttttgctaatttacaacagaatcacctaatggggccg
ggttttccctatggcctacctccattgcctcacaggcctccgcagaacccttttgtacaa
atacagagtcatcaacatgctgttggtcaagagccttttcacccgttgtcatctcgaaca
gtgtcatcttcttcgctccctagcttagaagagtatgaaccccgaggacctggccggccc
ttgtaccaaagaagaatctcatctagctcagtccagccttgttctgaagaagtaagcact
cctcaagacagtcttgctcagtgtaaagagcttcaggaccataataaccaatcttctttc
aacttttcctccccggagtcctgggtaaacaccacctcatctaccccctatcagaacatt
ccgtgcaatggatccagcaggacagcgcagcccagagagctgatcgctccacccaagacg
gtcaaaccctctgaggatcatctgaagtctgaaaacctcgaggtgtccagttccttcaat
tataatgtgctgcagcatctcggccagttccccccactcatgcccaacaagcagatcgcg
gagtcggccagcagcagcagccagcagagctctggaggcagcaagccggccatgtcctac
gccagcgctctgcgcgcccctcccaagcccaggcccccgccggagcaggccaagaagagc
agcgaccctctgtctctgttccaggaactcagcctggggagctcatcgggcagcaatggc
ttttactcctattttaaataa
DBGET
integrated database retrieval system
