Vicugna pacos (alpaca): 102541298
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Entry
102541298 CDS
T08098
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc04714
Thermogenesis
vpc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102541298 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102541298 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102541298 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102541298 (SMARCD1)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102541298 (SMARCD1)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102541298 (SMARCD1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102541298 (SMARCD1)
PBAF complex
102541298 (SMARCD1)
GBAF(ncBAF) complex
102541298 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
102541298
NCBI-ProteinID:
XP_015093589
UniProt:
A0A6J0AFX6
LinkDB
All DBs
Position
12
AA seq
463 aa
AA seq
DB search
MPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQ
QQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEAL
KRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRK
FSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQP
PQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRM
KFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTA
SQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGN
PEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagcggcctatccgagaccaggtatgctaccaggcagccgaatgacacctcag
ggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctagcc
cagtcagggatggaccagtcccgcaagagacctgcacctcagcagatccagcaggtccag
cagcaggcggtccaaaatcggaaccacaatgcaaagaaaaagaagatggctgacaaaatt
ctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttggct
tttgaaaggaaactggaccagactatcatgaggaaacggctagatatccaggaggccttg
aaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaatccg
gccaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggtagaa
ggacggctcctggaggattcagccttgtccaaatatgatgccaccaaacaaaagaggaag
ttctcttctttttttaagtctttggtgattgaactggacaaagacctgtatgggccagac
aaccatctggtagaatggcacaggaccgccactacccaggagacggatggcttccaggtg
aaacgaccaggagacgtgaatgtgcggtgtactgtcctactgatgctggattaccagccc
cctcagtttaaattagaccctcgtctggctcggctcctgggcatccacacccagacccgt
ccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggacccacat
gagcgggagtttgtcatctgtgacaagtacctccagcagatctttgagtctcaacgtatg
aagttttcagagatcccccaacggctccacgccttgcttatgcctccagagcccatcatc
atcaatcatgtcatcagtgttgacccgaatgatcagaaaaagacagcttgttatgacatt
gatgtggaagtggatgatactttgaagacccagatgaattctttcctgctgtctactgcc
agccagcaggagattgctactctagacaacaagatccatgagacaatagaaactatcaat
cagctgaagacccagcgggagttcatgctgagctttgccagagaccctcagggtttcatc
aacgactggcttcagtcccagtgtcgggacctcaagaccatgactgatgttgtgggtaac
ccagaggaagagcgccgagctgagttctacttccagccttgggcgcaggaggccgtgtgc
cgttacttctactccaaggtgcagcagagacgacaagaattagagcaagccctgggaatc
cgaaatacatag
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integrated database retrieval system
