Vicugna pacos (alpaca): 102541391
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Entry
102541391 CDS
T08098
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03022
Basal transcription factors
vpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102541391 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
102541391 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102541391 (ERCC2)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102541391 (ERCC2)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102541391 (ERCC2)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102541391 (ERCC2)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102541391 (ERCC2)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102541391 (ERCC2)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102541391 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102541391
NCBI-ProteinID:
XP_006208628
UniProt:
A0A6I9IEY3
LinkDB
All DBs
Position
11
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDHSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL
KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDAQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDSSLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtccatttcccatacgactacatctacccggag
cagttctcctacatgctggagctcaaacgcacgctggatgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgattatagcataccag
cgggcatatccactggaggtgactaaactcatctactgctcgaggactgtacctgagatt
gagaaggtgattgaagagcttcgaaagttgcttagcttctatgagaagcaggagggcgag
aagctgccgtttctggggctggctctgagctcccggaagaacctgtgtattcatcctgag
gtgacgcccctgcgctttgggaaggatgttgatggaaaatgccacagcctcacggcctcc
tacgtgcgggcgcaataccagcaggaccacagcctgccccactgccgcttctacgaggaa
tttgatgtgcatgggcgccaggtgcccctccctgccggcatctacaacctggacgacctg
aaggccctgggacggcgccagggctggtgcccatacttccttgctcgatactcaatcctg
catgccaacgtggtggtttacagctaccactacctcctggaccccaagatcgcagacctg
gtgtccaaggagttggcccgcaaggctgtcgtagtctttgatgaggcccacaacattgac
aatgtctgcattgactccatgagtgtcaacctcacccgccggaccctggatcggtgccag
ggcaacctggagaccctgcagaagacagtgctcaggatcaaggagacggacgcgcagcgt
ctgcgggaggagtaccggcgcttggtggaggggctgcgggaggccagcgccgccagggag
accgacgcccacctggccaaccccgtgctgcccgacgaggtgctacaggaggcggtgcct
ggctccatccgcacagctgagcacttcctgggcttcctgcggcggctgctggagtatgtc
aagtggcggctgcgtgtgcagcacgtggtgcaggagagcccgcccgccttcctgagcggc
ctggcccagcgcgtctgcatccagcgcaagcccctcagattctgcgccgagcgcctccgt
tccctcctgcacaccttggagattgccgacctggccgacttctcccctctcaccctcctc
gcaaactttgccaccctcgtcagcacctacgccaagggtttcaccatcatcatcgaaccc
tttgacgacaggaccccgaccattgccaaccccatcctgcacttcagctgcatggactcc
tcgctggccatcaagcctgtgtttgagcgcttccagtcagtgatcatcacatctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccctgtcaccatggcaacc
ttcaccatgacgttggcccgggtctgcctctgccccatgatcattggccgtggaaatgac
caggtggccatcagctccaaatttgagacccgggaagatattgcggtgatccggaactat
ggaaacctcctgctggagatgtccgctgtggtccccgatggcatcgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtacgagcagggcatcctcgaaaac
atccagaggaacaagctgctctttatcgagacccaagacggggctgagaccagcgtcgcc
ctggagaagtaccaggaggcctgtgagaacggccgtggggccatcctgctttcagtggcc
cgaggcaaagtgtccgagggaatcgacttcgtgcaccactacgggcgggctgtcatcatg
tttggtgtcccctacgtctacacccagagccgcattctcaaggcgcggctggaatatctt
cgggaccaattccagattcgagagaatgactttctcaccttcgatgccatgcgccacgca
gcccagtgtgtgggacgggccatcagaggcaagacggactatggcctcatggtcttcgcc
gataagcggtttgcccgggcggacaagcgggggaaactgccccgctggatccaggagcac
ctcacggatgccaacctcaacctgaccgttgacgagggggtccaggtcgccaagtacttc
ctgaggcagatggcacagccattccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctggagtcagaggagacgctgcggaggatagagcagatcgcgcagcagctg
tag
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integrated database retrieval system
