Vicugna pacos (alpaca): 102541415
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Entry
102541415 CDS
T08098
Symbol
ARHGEF28
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
102541415 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102541415 (ARHGEF28)
Membrane trafficking [BR:
vpc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102541415 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
Ank_2
Motif
Other DBs
NCBI-GeneID:
102541415
NCBI-ProteinID:
XP_031530839
UniProt:
A0A6J3AAQ9
LinkDB
All DBs
Position
3
AA seq
1705 aa
AA seq
DB search
MELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSRQRHVVIAERTEDNVLQSSVP
GHGLQETVTVSVCLCSEGYSPVTMGSDCVTYVDNMACRLARLLVTQAHRLTASSHQTLLT
PFALTVGALPALDEELVLALTHLELPPGWTVLGNSSVEVSLHRESVLHLAVRWGLAKLSQ
FLLCLPGGVQALALPNEEGATPLDLALHGGHSQLVEDITNFQGRRSPGFSRVQLSEDASL
RYIHSSETLTLTLNHTAEHLLEADINLFRKYFWDRAFLIKTLGEQEARSGEKPDMPSSAA
ETAEEIKNLVFSRSSPGKQDGKCVRSLETRPDGCEDQDSLDADCSCDVLKRSRHPPAFLA
AGRLSDMLNGGDEVYANCMVIDQVGDLDINYINIEGVTTDACPESMGSTRGPQSSKLIPP
TQTSPGVSPPKENKEVTSYTEVQPSFISSSSSYASNLNLSFGLHGFEKEQSHLKKRSSSL
DALDADSEGEGQSEQPHHCFTPVSQSSSRTGLPSGDELDSFETNPEADFNISRTESLSLS
SNPQLKESLLSGVRSRSYSCSSPKISLGKARLMRDFTVCSSVEEQRAYSLPEPPREKRIQ
EEEWDKYIIPAKSESEKYKVSRTFSFLRNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGT
FAGGLQCLACDKTVLGKESFQCCNCNANVHKGCKDAAPPCTKKLQEKYNKNKPQTILGNS
SFRDGPLPGPSLHPSASMPIGLPAGRKETTGQVHPLSRSVPGTTFESFRRSGMSLESESD
GSTWRSRSHSDEXFQPMGSSPSTDSFLMEVDVVDSSMWRDLSGDAQEFEAESWSLVVDPS
FCSRQEKDVIKRQDVIFELMQTEMHHIQTLLIMSEVFRKGMKEELQLDHSTVDKIFPCLD
ELLEIHRHFFYSMKERRQESGAGSDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHH
KEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYSK
ENTEEHKDLCKALGLIKDMIAAVDLKVSEYEKNXKWLEILSKIENKTYTKLKNGHVFRKQ
TLMSKERTLLYDGLVYWKTATGRFKDVLALLLTDVLLFLQEKDQKYIFAAVDQKPSVISL
QKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNTWMRRIQQAVESCPEEEGGRT
SESDEERRKAEARVARIQQCQEILSNQDQQICTCLEEKLHIYAELGELSGFEDVHLEPHL
LIKPDPGEPPQAASLLAAALKEAESLQVAVRASQMSDASRSSEQGCGEPALQDVLSPPGA
SGSPPASLVTEGTGGRGCWDVDPGTQGVGADLAVPDAGEKVEYRSFPGSSQSEIIQAIQN
LTRLLYSLQAALTIQDSHIEIHRLVLQQQESLSPGPFFRGSPFQDQERYRNLEKRREELA
NIHKLQHQFQQDQQRWHRRCDQQQREQAAKASWLQERERECQSQEELLLRSRGELDQQLQ
EYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGSMEVMELNRSES
LCHENSFFINEALVHMSLNTFNKPTSSDIHQDATYPRDMSHSALLRTNENPVDLKMDLSQ
PLDVSHELWIAAGSCHQIPPLHQSSEDPCKNDLDISQTEYPPLSDSNPHGPQLQTFIAEA
KLSLQRVTSPDGESGDGAEENIVYL
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaactgcagcgaagtacctctttatgggcagatgacggtctatgcgaagttt
ggcaaaaacgtttatcttcctaaagatgccgagttttactttatttataacggatctcgt
cagagacacgtcgtgattgcggagcgcacagaggataatgttctgcaatccagtgttcca
ggccacgggcttcaggagacggtgacggtgtctgtgtgcctctgctcagaaggttactcc
ccagtgaccatgggctccgactgcgtgacctacgtggacaacatggcctgcaggctggct
cgtttgctggtcacccaagcccatcgcctcacagccagtagccaccagaccttgctgacc
ccgtttgccctgacggtgggagcattgcctgctctggacgaggagctggtgctggctctg
acccatctggagttgcctcctgggtggactgtcttgggaaattcttcagttgaagtttct
ctacacagggagtctgttctgcacctggctgtgagatggggccttgccaagctctcccag
ttcctcctgtgtctcccgggtggcgtccaggccttggctctacccaacgaggagggtgcc
acgccattagatttagctttacatggcggacactcccagctggttgaagacatcacaaac
ttccagggcaggcggtccccaggcttctcccgggtgcagctcagcgaagacgcctccctg
cggtacattcactcatcagaaacactgaccctgacgctcaaccacacagccgagcatttg
ctggaggcagatattaacctcttcaggaagtacttttgggatagagcctttctcatcaag
actcttggagagcaagaagctaggtcaggggaaaaaccagatatgccctccagtgctgca
gaaaccgcagaagagattaagaatttggtgttcagcagatcgtcacctggaaagcaggat
ggaaagtgtgtgagaagcctggagactcgaccggatgggtgtgaggaccaggacagccta
gatgcagattgttcctgtgatgtcctcaaaagatccaggcatcccccagcgttccttgct
gccggccggctttctgacatgcttaatggtggagatgaagtctatgctaactgcatggtg
atagatcaggttggtgatctggacattaactatattaatatagagggagtcactacagac
gcttgccctgagtccatgggttctactcgggggcctcagagcagcaagctcatccctcct
acccaaaccagccctggagtgtccccaccaaaggagaacaaggaagtgacatcatacact
gaagtgcagccgtctttcatctcatcatcaagctcatatgcttccaatttgaatctttct
tttggtcttcatggatttgaaaaggaacagagtcatctaaagaaaagaagttccagcctt
gacgccctggatgccgacagtgagggcgaagggcaatcggagcagccacaccattgtttc
actccagtgtctcagagctcctcgagaactggccttcctagtggggacgagctggactcc
tttgagaccaaccctgaagcagattttaatatctccaggactgaatcactttctttatca
agtaacccacagctgaaggaatcattgctttctggagttcgctcacgttcttattcctgc
tcatcacccaaaatttctttaggaaaagctcgactgatgcgtgattttacagtgtgcagt
tcagttgaagagcaaagagcttacagcttaccggagccaccaagagaaaaaagaattcag
gaggaagaatgggataaatacatcataccggccaaatcagagtctgaaaaatacaaagtg
agtcggactttcagcttcctcaggaataggatgaccagccctcggaataaatctaagaca
aaaggcaaggatgccaaagacaaagagaaactgagtcgacatcagtttgtccctggaaca
ttcgctgggggtctgcagtgtttggcctgtgataaaacggtcctggggaaagagtcattc
cagtgctgcaactgtaatgcgaacgtacataagggctgtaaagatgccgcccctccctgt
accaagaaactccaagagaaatataacaagaacaaaccacagaccatccttggaaattct
tcgtttagagacggccccttgcctggtccctccttgcacccttccgcctccatgccgatc
gggctgccggctgggaggaaggaaaccacagggcaagtccatccgttgtccagaagcgtt
cctggcaccaccttcgaaagcttcaggaggtcagggatgtccctggagtccgagagtgac
gggagcacctggagaagcaggtcgcattccgatgagntgttccagcccatgggctcgtct
ccctccacggactccttcttaatggaagttgatgtcgtggattcatctatgtggcgtgac
ctcagcggtgacgcccaggagttcgaagcagaatcttggagtctggtggtggacccctcg
ttttgtagtcggcaggagaaggatgtcatcaagagacaggatgtcatttttgagctaatg
cagacagagatgcaccacatccagaccctgctcatcatgtctgaggtcttccggaagggg
atgaaagaggagctgcagcttgaccacagcaccgtggataaaatcttcccctgtttagat
gagttactcgaaatccacaggcatttcttctatagtatgaaggagcgaaggcaggaatcc
ggtgctggcagcgacaggaatttcatcatcaaccgaattggcgatattctagtccaacaa
ttttcagaagaaaatgcaaataaaatgaagaaaatatatggagaattctgtagccaccac
aaagaggctgttagcctctttaaagaactccagcagaataaaaagtttcagaattttatt
aagctccgaaacagtaatcttttggctcgaaggcgaggaattccagaatgcattctgctg
gtcactcagcgcatcacaaaataccctgtcttggtggaaaggatattgcagtacagtaag
gagaacactgaagaacataaagacttatgcaaagctcttggcttaattaaagacatgatt
gcagccgtggatttaaaagtcagcgaatatgagaaaaacnaaaaatggcttgagatccta
agtaagatcgaaaacaagacatacaccaagctcaagaacggccatgtgtttaggaagcag
acgctgatgagtaaagagaggaccctgctgtatgacggccttgtttattggaaaacggct
acgggtcgtttcaaagatgtcctagctctactcctgactgatgtgctgctatttttacaa
gaaaaagaccagaaatacatctttgcagcggtcgatcagaagccatcagtgatttccctt
cagaagctgattgctcgagaagttgcgaatgaggagagagggatgtttctgatcagcgct
tcctctgctggtcctgagatgtatgaaattcataccaattccaaggaggaacgaaatact
tggatgagacggatccaacaggcagtagaaagttgcccagaagaggaagggggaaggaca
agcgagtctgatgaagagaggcggaaagctgaagccagagtggccagaattcagcaatgc
caagaaatactcagtaatcaagaccaacagatttgtacatgtttggaggagaagctgcat
atctatgctgaacttggagaactgagtggatttgaggatgtccatctagagccccacctc
ctcattaaaccagaccccggagagcctccccaggcagcctcattactggcagcagcactg
aaagaagcagagagcctgcaggtggcagtgagggcctcgcaaatgagcgacgcgagccgg
tcatcggagcaaggctgcggagagcctgctttgcaggatgtgctcagccctccgggcgcg
tcaggatcgcctcctgcttcactagtcacagaagggacaggaggaagaggctgttgggat
gtggatcctgggacccagggtgtgggagccgacctggcagtccctgatgcaggggagaag
gtggaatatagaagtttcccaggttcttcccagtcagagattatacaagcgatacagaat
ttaacccgtctcttatacagccttcaggccgccttgaccattcaggacagccacattgag
atccacaggcttgtgctccagcagcaggagagcctgtcccccggcccctttttccgaggc
agcccctttcaggaccaggagaggtaccgcaacctggagaagcggcgggaggagctggcc
aacatccacaagctccagcatcagttccagcaggaccagcagcgctggcaccgcaggtgc
gaccagcagcagcgggagcaggcggccaaggccagctggctgcaggagcgcgagcgggag
tgccagtcgcaggaggagctgctgctcaggagccgcggggagctggaccagcagctccag
gagtaccagcagaacctggagcggctgcgggagggccagcgcctggtagagagggagcgg
gagaggatgcgggcccagcagagcctgctgtgcggctggaaacacagccggcagagtagc
cttcccgcagcgttttccccgggaagcatggaggtaatggaacttaatcgatctgagagt
ttatgtcatgaaaattcattcttcatcaatgaagctttagtacatatgtcacttaacact
ttcaacaaaccaacttcatcagatatccatcaggatgccacgtacccccgagatatgtct
cattctgctttgctaaggactaatgaaaatccagtggacctcaagatggacctttctcag
cccttggatgtcagccatgaactgtggatagccgctgggtcctgccatcagataccccct
ctccaccaaagcagcgaggatccttgtaaaaatgatttggacatctctcagactgaatac
ccaccccttagcgactccaatccacacggccctcagctgcagacatttatagcagaagca
aagctcagtctacagagagtgaccagcccagatggggaatctggagatggagcagaagaa
aatattgtttacctctaa
DBGET
integrated database retrieval system
