Vicugna pacos (alpaca): 102541606
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Entry
102541606 CDS
T08098
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102541606 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102541606 (DHX36)
03012 Translation factors [BR:
vpc03012
]
102541606 (DHX36)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102541606 (DHX36)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102541606 (DHX36)
Translation factors [BR:
vpc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102541606 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
ResIII
RsgA_GTPase
AAA_23
DUF6782
AAA_34
NACHT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102541606
NCBI-ProteinID:
XP_006202889
UniProt:
A0A6I9I6K8
LinkDB
All DBs
Position
1
AA seq
1011 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGGHGGGHSGNRGSGGGGGGGGGGRGGRGRHPGH
LKGREIGLWYARKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKSDKDSEAQISW
FTPEDHGYGTEAPAENRPNSVKKIEDQEKKLINQEKRPFRIRDKYIDRDSEYLLQENEPD
VTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMINNHQVTVISGETGCGKT
TQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQ
SRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSYR
PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQ
FKRGFMQGHVNRQDKEEKEAIYKERWPGYVRELRKRYSASTVDVMEMMDDDKVDLNLIAA
LIRYIVLQEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVF
KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK
QRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSR
LMDPPSDEAVSLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP
VLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARQRGFRYE
KDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICA
GLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSI
YLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILL
QQKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRFQEGYYS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggccccgcagctccggcggg
ggttatggaggaagctatggagggggccatggaggaggccattcggggaaccgaggctcc
ggaggtggcggcggcggaggaggaggtggtcgaggcggccgaggccgacatcccgggcac
ctgaaaggccgcgaaatcggcttgtggtacgcgaggaaacaaggacagaaaaacaaggag
gccgagaggcaggagagagctgtagtacatatggatgaacgtcgagaagagcagatcgtg
cagctgctacattctgtgcaagctaagagtgataaagattcggaagcacaaatatcctgg
tttactcctgaagatcacggatatggtactgaagctcctgctgagaatagaccaaactca
gtaaagaaaattgaggatcaggaaaaaaaattaataaatcaagaaaaaaggccatttaga
atcagggacaaatatattgaccgcgattctgaatatcttttgcaagaaaatgaaccagat
gtaactttggaccaacagttattggaagatttacaaaagaaaaaaactgaccttcggtat
attgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaattagta
aatatgatcaacaaccatcaggtaacagtaataagtggtgaaactggttgtggaaaaacc
actcaagttactcagttcattttggataactacattgaaagaggaaaaggatctgcatgc
aggatagtttgtactcagccgagaagaattagtgccatttcagttgcagagcgagtggct
gcagaaagggcagaatcttgtggcaatggtaatagtacgggataccagattcgtctacag
agtcggttgccaaggaaacaaggttctatcttatattgtacgacaggaatcatccttcag
tggcttcagtcagacccgcatttgtccagtgttagtcatatcgtgcttgatgaaatccat
gagagaaatctacagtcggatgttttaatgactgttattaaagatcttctcagttatcga
cctgatctgaaggtaatactgatgagtgcaacattgaatgctgagaaattttcagaatac
tttggaaactgtccaatgatacacatacctggttttacctttccggttgtggagtatctt
ttggaagatataattgagaaaataaggtatgttccagaacaaaaagaacacagatcccag
tttaaaaggggtttcatgcaaggacatgtaaatagacaagacaaagaagaaaaagaagca
atctataaagaacgctggccaggttatgtgagagaactgcggaaaaggtattctgcaagc
actgtagatgttatggaaatgatggatgatgataaagttgatctgaatttgattgctgcc
cttattcgatatattgttttgcaagaagaggatggtgcaatactggtctttctaccaggc
tgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgtttaaatcagat
agattccttattatacctttacattcactgatgcctacagttaaccagacacaggttttt
aaaagaacccctcctggtgttcggaaaatagtcattgctaccaatattgcagagaccagc
attaccatagatgatgtagtttatgtgatagacggaggaaaaatcaaggagacacacttt
gacacacagaacaacatcagtacaatgtctgctgagtgggttagtaaagctaatgccaag
caaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctgtataatggt
cttagagccagccttctagatgactatcagctgccggaaattttgagaacacctttggaa
gaactttgtttacaaataaagattttaaggcttggtgggattgcttactttctgagtagg
ctaatggatccaccatcagacgaagcagtgtcactctccataaatcatctgatggaactg
aatgctctggataaacaggaagaattgacacctcttggagtccacttagcacgattacca
gttgagccacacattgggaaaatgattcttttcggagctctgttctgttgcttagacccg
gtactcaccattgctgctagtctcagcttcaaagatccttttgtgattccattgggaaaa
gaaaaagttgcagatgcaagaagaaaggaattggcaaaggatactaaaagtgaccacctg
acagtcgtgaatgcatttgagggctgggaagaagctagacaacgtggtttcagatatgaa
aaagactattgctgggaatattttctgtcttcaaacacactgcagatgctgcataacatg
aaagggcagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaa
gatccaaaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgct
ggtttatatcccaaagttgctaaaatccgactaaatctgggtaaaaaaagaaaaatggta
aaggtttacacaaaaaccgacggactagttgctattcatcctaaatctgttaatgtggag
caaacggagtttcactacaactggcttatctatcacctgaagatgagaacaagcagtata
tacttgtacgactgcacagaagtctccccatactgtctcttgttctttggaggtgatatt
tccatccagaaggataacgatcaggaaactattgctgttgacgaatggattatctttcag
tctccagcaagaattgcccatcttgttaaggaattaagaaaggaactcgatatccttctg
caacagaagattgaaagtccccaccctgtagactggaaggacactaaatccagagactgc
gcggtgctctcagccatcatagacttgatcaaaacgcaggaaaaagcgactcctaggaac
ttgcctccacgcttccaggagggatactacagctga
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