Vicugna pacos (alpaca): 102541638
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Entry
102541638 CDS
T08098
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X4
KO
K11267
sister chromatid cohesion protein PDS5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102541638 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102541638 (PDS5B)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102541638 (PDS5B)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
102541638 (PDS5B)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
102541638 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
102541638
NCBI-ProteinID:
XP_006209029
UniProt:
A0ABM5EGC7
LinkDB
All DBs
Position
14
AA seq
1446 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESDEQ
QWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPS
AVEEEEEEERQSGNTEQKSKSRQHRTSRRAQQRAESPETSAVESTQSTPQKGRGRPSKTP
SPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVNDDNPQEETEEEEVSTVNVRRRS
SKRERR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaagaaccaatgatggaaaaattacctatcctcctggtgtcaag
gaaatctcagacaaaatatctaaagaagagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaggaaaaggagctttatttaaacctagct
ttacatcttgcttcagactttttcctcaagcatcctgacaaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttatacgtccccc
gataaactaaaggatatatttatgtttataacaaggcagttgaaggggctagaggataca
aagagcccacaattcaataggtatttttatttacttgagaacattgcttgggtcaagtcg
tataacatatgctttgagttggaagatagcaatgaaatttttacccagttatacagaacg
ttattttcagttataaacaatggccacaatcagaaagttcatatgcacatggtagacctc
atgagttctattatttgtgaaggagatacagtatctcaggagcttttggatacggttttg
gtgaatctggtacctgcccataagaatttaaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagtgatttgtcagagcatgtctttgacttgattttg
gagctctataatattgatagccatttgctgctctcagttttaccccagcttgaatttaaa
ttgaagagcaatgataatgaggaacgcctacaagttgttaaactactggcaaaaatgttt
ggggcaaaggattcagaattggcctctcaaaacaaaccgctctggcagtgttacttgggc
aggtttaatgacattcatgtaccaatccgcctggaatgtgtgaaatttgctagccattgt
ctcatgaaccatcctgatttagcaaaggacttaacagagtatcttaaagtgaggtcacat
gatcctgaggaagctattagacatgatgttattgtgtctatagtcacagctgctaaaaag
gatattcttctggtcaatgatcacttgcttaattttgtgagagagagaacattagacaaa
cggtggagagtgcgcaaagaggcaatgatgggacttgcccagatttataagaaatatgct
ttacaatcagcagctggaaaagatgctgcaaagcagatttcatggatcaaagacaaattg
ctacatatatattatcaaaacagtattgatgatagattgcttgttgaacggatctttgct
cagtacatggtcccccacaatttggaaactacagaacggatgaaatgcttatattacttg
tatgccacactggacttaaatgctgtgaaagcattaaatgaaatgtggaaatgtcaaaat
ctgctcagacatcaagtaaaggatttgcttgacttaattaagcaacctaaaacagatgcc
agtgtcaaggcaatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggcgcaggatttcatgaagaaattcacacaggtgttagaagatgatgagaaaataaga
aaacagttagaagtacttgtcagtccaacatgttcctgcaagcaggctgaaggttgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatccttttctggaaatg
atcaagtttctcttggagaggatagcacctgtgcatatagatactgaatctatcagtgct
cttataaagcaagtgaacaaatcaatagatggaacagcagatgatgaagatgaaggtgtt
ccaactgatcaagccatcagagcaggtcttgaactacttaaggtactctcatttacacat
cccatctcgtttcattctgctgaaacatttgagtctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccagattttcaaaaacacaggaagcaaaattgaa
gaggatttcccacacatcagatcagctttgcttcctgttttacatcacaaatctaaaaaa
ggacccccccgtcaagccaaatatgctattcattgtatccatgcgatattttctagtaaa
gagacccagtttgcgcagatatttgagcctctgcataagagcctagatccaagcaacctg
gaacatctcataacaccgctggtcactatcggtcacattgctctcctcgcaccagatcag
tttgctgctcctttgaagtctttggtagctactttcattgtgaaagatctcctcatgaat
gatcggcttccaggaaaaaagacaactaaactttgggttccagatgaagaagtttcacct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaaa
aataatcacagtaaatcaggaacttctactttaagattgctcacaacgatattgcatagt
gatggagacttgacagaacaggggaaaattagtaaaccagatatgtcacgcctgagactt
gctgctgggagtgctattgtgaagctggcacaagaaccctgttaccatgaaattatcaca
ttagaacagtatcagctatgtgcgttagctatcaatgatgaatgctatcaagtaagacaa
gtttttgctcagaagcttcacaaaggcctttctcgattacggcttccacttgagtatatg
gcaatctgtgcactttgtgcaaaagatcccgtaaaagaaagaagagcccatgccaggcag
tgtctggtaaaaaatatcaatgtgagacgcgagtatctgaagcagcatgcagctgttagt
gaaaaattactgtctcttctacctgagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagagtgt
ctttggttcgttctggaaatattaatggcaaagaatgaaaataacagccatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaagatgctcaaggaccagatgatgcaaaa
atgaatgaaaaactgtatactgtgtgtgatgttgccatgaatatcatcatgtcaaaaagc
accacatacagtttggaatctcctaaagacccagtactacctgctcgttttttcacccaa
cctgacaagaacttcagtaacaccaaaaattatctgcctccagaaatgaaatcatttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccgctttcatca
gcaggcaaacaatcgcagacaaaatcatcacgaatggaaactgtaagcaatgcaagcagt
agttcaaatccaagctctcctgggagaataaaagggaggcttgatagttctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccaggaaaaaaaagtgacaag
agagacgactctgatctttctgaattggacaagcctagaagccggaagaaaacacctgta
acagattcagaagagaaattaggcatggatgacctgactaagttggtccaggaacagaaa
cctaaaggcagtcagcgtggacggaagagaggccatacggcttcagaatcagatgaacag
cagtggcctgaggaaaagaggcttaaagaagatattttagaaaatgaggatgaacagaat
agtccaccaaaaaaaggtaaaagaggacggccaccaaaacctcttggtggaggtacaccc
aaagaggagccaacaatgaaaacttctaaaaaaggaagcaaaaaaaaatcgggaccatca
gcagtggaagaagaggaagaagaagaaagacaaagtggaaacacagagcagaagtcaaaa
agcagacagcaccgaacttcaaggagagcacaacagagagcagaatctcctgaaactagt
gcagttgaatccacacaatccaccccacagaaaggacgaggaagaccatcaaaaacgcca
tcaccatcccaacccaaaaaaaatgtccgtgtaggacgctccaaacaagcagctactaaa
gaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtcaatgatgat
aacccacaggaagaaacagaggaagaggaagtttctacagtaaatgtgcggcggcgaagt
tctaaaagagaaaggcggtga
DBGET
integrated database retrieval system
