Vicugna pacos (alpaca): 102541760
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Entry
102541760 CDS
T08098
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102541760 (CHD1)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102541760 (CHD1)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102541760 (CHD1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102541760 (CHD1)
SLIK complex
102541760 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
102541760
NCBI-ProteinID:
XP_015102209
UniProt:
A0A6J0AT86
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQQQHQASSN
SGSEEDSSSSEDSDDSSSEIKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETE
SDYEPKNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEEDEDYDNDKRSSRRQATV
NVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVE
ADGDPNADFEKNKEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQE
TKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPY
SECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEG
LELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVP
LSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLK
DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEM
SALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE
ALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSI
KGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSST
PFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQ
FKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAK
QISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSY
KKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVK
GPTFRISGVQVNAKLVISHEEELIPLHRSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDD
SNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLA
RKEAQRLSGAGGSKRRKARAKKNKTMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVK
HPNKKIKTERDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFK
EKRENKVKEAIQKEKDIKEEKLSESKPDSKERSKKSSVSDAPVHITASGEPVPISEESEE
LDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNP
EQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNTQMIRNPDVE
RLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKTDSRKRPYSSFSNGKDHRDW
DHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRSSSE
YTHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSR
KT
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacatagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatctggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcagcagcagcatcaagcttcatctaat
agtggatcagaagaggattcctctagcagtgaagattctgatgactcatcgagtgagatc
aaaaggaaaaagcataaagatgaagattggcagatgtctgggtcgggatctccatctcag
tctggctcagattcagaatctgaagaagaaagagataaaagtagttgcgacgaaacagag
tctgattacgagccaaaaaacaaagttaaaagcagaaaacctcaaaatagatctaagtca
aaaaatgggaagaagattattggacagaaaaagagacagattgattcatctgaggaggag
gaggaagaggatgaagattatgataatgataaaagaagttctcgtcgccaagcaactgtc
aatgttagctataaggaagatgaagaaatgaaaacagactctgatgatctactggaagtc
tgtggagaagatgttcctcaacctgaggaagaggagtttgaaacaatagaacgatttatg
gattgtcgaattggaagaaaaggagctactggtgctactacaaccatttatgcagttgaa
gcagatggtgacccgaatgcagattttgaaaaaaacaaggaaccaggagaggtccagtat
ttaataaagtggaaaggatggtcacatatccacaatacttgggagacagaagaaaccctt
aagcagcagaatgttagaggaatgaaaaaattagataattataagaaaaaagatcaggaa
acaaaaagatggttgaagaatgcttctccagaagatgtggaatattataattgccagcaa
gaacttacagatgatctccataagcagtatcaaatagtggagcgaataattgctcattcc
aatcagaagtcagcagctggctatcctgattattattgcaaatggcagggccttccatac
tcagagtgcagctgggaagatggagctctcatttccaaaaagtttcaagcatgcatagat
gagtattttagcaggaatcagtcaaaaactactccttttaaagactgcaaagtattaaaa
caaaggccaagatttgtagccctgaagaagcagccgtcctatattggaggacatgagggt
ttagaattaagagattatcaattgaatggtttaaattggcttgctcactcttggtgcaaa
ggaaatagttgcatacttgctgatgagatgggccttggaaaaacaatacagacgatctca
tttctgaactatttgtttcatgagcaccaattatacggaccttttctgttagtagtaccc
ctctccactctcacttcctggcaaagggagattcagacatgggcttctcaaatgaatgct
gtggtttatttaggtgacattaacagcagaaacatgataagaactcatgaatggatgcat
ccacagaccaaacggttaaaatttaatatactattaacaacttacgaaatcttattgaag
gataaggcattccttggaggtctgaattgggcatttataggtgtagatgaagcacatcga
ttaaagaatgatgactctcttctgtataaaactttaatagactttaagtccaatcaccgt
ctccttatcactggaactcctctgcaaaactccctcaaagagctctggtctttgctacat
ttcattatgccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggc
agagaatatggttatgcaagcctccacaaggagcttgagccgtttctgttacgcagagtt
aagaaagatgtggaaaaatctcttcctgctaaggttgagcagattttaagaatggaaatg
agtgctttacagaaacaatactacaaatggatattaactaggaattacaaagccctcagc
aaaggttccaagggcagtacctcaggctttttgaatattatgatggagctaaagaaatgt
tgtaaccattgctacctcattaaaccaccagataataatgaattctataataaacaggag
gccttacaacacttaatccgtagtagcggaaaattgattcttcttgacaaactcttaatt
cgcctaagagaacgaggcaatagagttcttattttttctcaaatggtgcggatgttagat
atacttgcagaatatttgaaatatcgtcagttcccctttcaaagattagatggatcaata
aaaggggagctgaggaaacaagctctagatcattttaatgctgaaggatcagaggacttc
tgctttttgctttccacaagagctggaggtttaggaattaatttagcctcagctgacact
gttgttatatttgattctgattggaatccacaaaatgatcttcaggcacaggcgagagct
catcgaattgggcaaaagaaacaggtgaacatttatcgtctagttacaaagggatcagtt
gaagaggatattcttgaaagggccaaaaagaagatggttttagatcatcttgtcattcaa
agaatggacacaactgggaagacagtactacatacaggttctgccccctcaagttctact
cctttcaataaagaagaattatcagccattttaaagtttggtgctgaggaactttttaag
gaaccggagggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagg
gctgaaactcatgaaaatgaaccaggccctttaactgtaggagatgaattactttctcag
ttcaaggttgccaacttttcaaatatggatgaggatgatattgagttggaacctgaaaga
aattccaagaattgggaagaaatcattcctgaagatcaaagaagacgattagaagaggaa
gaaagacaaaaggaactcgaggaaatttatatgctcccaagaatgagaaactgcgcaaaa
cagattagtttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatct
gatagtgattcgatctctgaaaggaaaagaccaaagaaacgtggaagaccacggactata
cctcgggaaaatattaaaggatttagtgatgcagaaattcggcggtttatcaagagttac
aagaaatttggtggccctctggaaagattggatgcaattgctcgagatgctgaattagtt
gataagtcagagacagacctcagacgactaggagaattggtacataatggttgcattaaa
gctctgaaggacaattcttcaggaacagaacgaacaggtggtagacttggaaaagtaaag
ggtccaacattccgaatatcaggagtacaggtgaatgccaagctagtcatctcccatgaa
gaagaattaataccattgcacagatccattccttcagatccagaggaaagaaagcagtat
actatcccatgccacacaaaggcagctcattttgatatagactggggcaaagaagatgat
tccaatttgttaattggtatctacgagtacggatatggaagctgggaaatgattaaaatg
gatcctgacctcagtctgacacacaagattcttccagatgatcctgataaaaaaccacaa
gcgaaacagttacagacacgtgcagactacctcatcaaattacttagtaaagatcttgca
agaaaagaagctcagaggctttctggtgcaggaggttcaaagaggagaaaagcacgagct
aagaagaataaaacaatgaagtctataaaagtgaaagaggaaataaagagtgattcttct
cccctgccctcagaaaagtccgatgaagatgatgataaggatgagatcacttctgtgaaa
catccaaataaaaaaattaaaacagaaagagacagtgaagaaaaacctgagccagatgtt
tgtataaagaaggaaccagaagaaaagagggaagcaaaagaaaaggaaaataaaagagaa
cttaaaagggagataaaggaaaaagaggataagaaagatataaaggaaaaagattttaaa
gaaaaaagagaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaa
aagttgagtgaatccaagcctgatagcaaggaacgatctaagaaatcttcagtgtcagat
gctccagttcatatcactgcaagtggtgaaccagttcccatatctgaagaatctgaagag
ctagatcagaagacattcagcatttgtaaagaaagaatgaggcctgtcaaagcagctttg
aagcaacttgataggcctgagaaaggcctttcagaaagagaacaactggaacatactaga
caatgcttaataaaaattggagaccacatcacggaatgtctgaaagagtatacaaatccc
gaacaaatcaagcagtggagaaaaaacctgtggatttttgtatctaagtttactgagttt
gatgcaagaaaattacataaattatataagcatgctattaaaaaacggcaggaatctcag
caaaataatgaccagaacagcaacttgaatactcagatgattcgaaatccagatgtggaa
agattaaaagagaacacaaatcatgatgatagcagcagggacagttattcatctgataga
cacttatctcagtatcatgatcatcataaagaccgacatcagggagactcttataaaaag
actgactctaggaaaagaccctattcttcttttagtaatggtaaagatcatcgtgattgg
gatcactacaagcaagacagcagatattacagtgatagagagaaacacagaaaactggat
gatcacaggagtagagaccacaggtcaaatttggaaggaagtttaaaagacagatctcat
tctgatcatcgttctcactcagaccatcggttacattcagaccatcgttcaagttctgaa
tatacacaccataaatcttccagggattacaggtatcactcagattggcaaatggaccac
agagcttccagtagcggccctagatcaccactagatcagaggtctccttacggctccaga
tctccatttgaacactcaattgaacacaaaagtacacctgagcatacctggagtagtcgg
aaaacataa
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integrated database retrieval system
