Vicugna pacos (alpaca): 102541883
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Entry
102541883 CDS
T08098
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03018
RNA degradation
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102541883 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
102541883 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102541883 (LSM7)
03041 Spliceosome [BR:
vpc03041
]
102541883 (LSM7)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102541883 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
102541883 (LSM7)
Spliceosome [BR:
vpc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102541883 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
102541883
NCBI-ProteinID:
XP_031545601
UniProt:
A0A6J3BM68
LinkDB
All DBs
Position
22
AA seq
157 aa
AA seq
DB search
MSPGPRRRRRQMFPSNAPALSRRRASAVRPPRMRAGRGQRARRGRLRTAARRGKMADKEK
KKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTE
DTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgggtccccgccgcaggcgtcggcagatgtttcccagcaacgccccggcgctc
tcgcggcgtcgcgcaagcgccgtgcgtccgccacgcatgcgcgcgggcagggggcaaagg
gcacggcgggggcgcctgcgcacagcggcgcggcgcggcaagatggcggacaaagaaaag
aagaagaaggagagcatcttggatctgtccaagtacatagacaagacgatccgcgtgaaa
ttccagggaggtcgcgaagccagtggaatcctgaaagggtttgacccgctcctcaacctc
gtgctggacggcaccatcgagtacatgagagaccccgatgaccagtacaagctgacggag
gacacgcggcagctgggcctggtggtgtgcaggggcacctccgtggtgctcatctgccct
caggacggcatggaggccatccccaaccccttcatccagcagcaggacgcctag
DBGET
integrated database retrieval system
