Vicugna pacos (alpaca): 102541892
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Entry
102541892 CDS
T08098
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03320
PPAR signaling pathway
vpc04659
Th17 cell differentiation
vpc04919
Thyroid hormone signaling pathway
vpc04920
Adipocytokine signaling pathway
vpc04928
Parathyroid hormone synthesis, secretion and action
vpc05200
Pathways in cancer
vpc05202
Transcriptional misregulation in cancer
vpc05207
Chemical carcinogenesis - receptor activation
vpc05216
Thyroid cancer
vpc05222
Small cell lung cancer
vpc05223
Non-small cell lung cancer
vpc05226
Gastric cancer
vpc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102541892 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102541892 (RXRG)
03320 PPAR signaling pathway
102541892 (RXRG)
04919 Thyroid hormone signaling pathway
102541892 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
102541892 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102541892 (RXRG)
05202 Transcriptional misregulation in cancer
102541892 (RXRG)
05207 Chemical carcinogenesis - receptor activation
102541892 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
102541892 (RXRG)
05216 Thyroid cancer
102541892 (RXRG)
05222 Small cell lung cancer
102541892 (RXRG)
05223 Non-small cell lung cancer
102541892 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102541892 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102541892 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
vpc03310
]
102541892 (RXRG)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102541892 (RXRG)
Nuclear receptors [BR:
vpc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102541892 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
102541892
NCBI-ProteinID:
XP_006209090
UniProt:
A0A6I9IDD9
LinkDB
All DBs
Position
21
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPGHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLSGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattctcacttcatgaagtttcccaccggcttcggcggctcccctggc
cactctggctccacgtccatgagcccatcggcagccttatctacagggaagccaatggac
agccaccccagctacacggacaccccagtgagtgccccacggactctgagtgcggtgggt
acccccctcaatgccctgggctctccgtatcgagtcatcacttctgccatgggcccaccg
tcaggagcactggcagcccctccaggaatcaatttggttgccccgcccagctctcagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaagcccttatcagggcttcccggc
atcggaaatatgaactacccgtccactagccctggctctctggttaaacacatctgtgcc
atctgcggggacagatcctcagggaagcactatggtgtgtacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatctacacgtgccgggacaataaagac
tgcctcattgacaagcgccagcgtaaccggtgccagtactgccgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagagaggcagagaagccgggagcgggca
gagagtgaggcggagtgtgccagcagcggccatgaagacatgcctgtggagaggattcta
gaagctgaacttgccgttgaaccaaagacggaatcctatggtgacatgaacatggaaaac
tcgacgaatgaccctgtcaccaacatatgccatgctgctgataagcagctgttcacgctc
gttgaatgggccaagcgcatcccccacttctccgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgaattgctcatcgcctccttttcccaccgctcggtttct
gtgcaggatggcatccttctggccacgggtttacacgtccaccggagcagtgcccacagc
gctggggtcggctccatctttgacagagtcctcaccgagctggtctccaagatgaaagac
atgcagatggataagtcggagctggggtgcctgcgagccatcgtgctgtttaacccagat
gccaagggtctgtccaacccctccgaggtagaaactctgcgagagaaagtttatgccacc
ctcgaggcgtacaccaagcagaagtacccggaacagccaggcaggtttgccaaactgctg
ctgcgcctcccagccctgcgctccatcggcttgaaatgcctggagcaccttttcttcttc
aagctcatcggggacacgcccattgacactttcctcatggagatgttggagaccccgctg
cagatcacctga
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