Vicugna pacos (alpaca): 102542166
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Entry
102542166 CDS
T08098
Symbol
UTP20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpc03009
]
102542166 (UTP20)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102542166 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
MBTPS1_3rd
Motif
Other DBs
NCBI-GeneID:
102542166
NCBI-ProteinID:
XP_031539064
UniProt:
A0A6J3AYY8
LinkDB
All DBs
Position
12
AA seq
2780 aa
AA seq
DB search
MKTKPVSHKTENTHRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKIHLQIKNSYAYQPLLDLVVQLARDLQM
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSSIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKVEGVGQLLFEMCKGVRNMFH
SCTEKAVKLILQKLGPVTETETQLPWILVGGTLKNMVKSTAIYICKEHFGIFFECLQDSL
LDLHKKVTKTNCDESSEQIKRLLETYLILVKHGNGSKITKPIDVCKVLSQTLQIAHLSTS
CRETLLDVISALILGENVSLPETVIKETIEKIFASRFERHLILDFSEVMFAMKQFEQLFL
PSFLLYIKDCFLIDDAAVEDGALAILAKLILNKAAPPTAGSMAIEKYPLLFSRHTVGSCV
RQKTRSKGGKEQISVLDHLLSIIQLLPNKDTTYLSRSWAALVVLPHVRPLEKEKVIPLVT
CFIESLFRTVDRGSFGKGSLFVLCQAVNTLLSLEESSELLHLVPVERVKNLVSMFPLEPS
VLLLADLYYQRLSLCGCKGPLSEEALMELFPKLQANISTGISKIRLLTIRILNHFEVRLP
ELMEDDELSKRQSVFAILRQAELVPATVNDYREKLLYLRKLRHDVVQTAVPDGPLQEVPL
RYLLGMLYVNFSALWDPVIELISSYAHEMENKQFWKVYYEHLEKAATHAEKELQNDTRDE
ETSIGDGSWEQTQEGDIGALYHEQFSLKTDLQERLDHTNFRFLLWRGLAKFPERVEPRSR
ELSPLFLRFINNEYYPADLQVAPTQDLQRKSKGLAAEEMEEEPAARDDEELEEELVPQDE
PSQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQMVQKITLDCI
MTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNTVVKTAHRVDLFPILMRILYGRM
KNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQIFLDLLFEPVKHFKNGECHSAVIQAV
EDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQREKI
QLRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGAVWPQISRLGSESQYSPT
PLLKLISIWSRNARYLPFLAKQKPGHPECDILTNVFAILSAKNLSEATASIVMEIADDLL
SLPDFEPTDTVLSLPVTGCVYTESTDESITIGGRLILPHVPAILQYLSKTTISAEKVKKK
KNRAQVSKELGILSKISKFMKDKEQSSLLVTLLLPFLHRGNIAQDTEVDILVTIQNLLKH
CLEPTSFLKPLAKLFSVIKNKLSRQLLCTVFQTLSDFESGLKYITDVVKLNAFDQRHLDD
INFDVRFSAFQVITSYIKEMQTVDVNYLIPVMHNCFYNMELGDMSLSDNASMCLMTVIKK
LAALDVTEKEYREVIHRSLLERLRKGLKSQTESVQQDYTTLLSCLIQTFPNQPEFKDLVQ
LTDCHDPETDFFENMKHIQIHRRARALKKLAKQLTEGKIVLSSKSLQNYIMPYAMTPVFD
EKMLKHENITIAATEVIGAICKHLSWSAYIYYLKHFIHVLQTGQINQKLGVGLLVIVLEA
FHFDHKTLEEQMRKIQNEENTVEVTELPEHDAMELEHTDEDEKEDEDGCETLSYNKEELE
NPDPAEGTSAKESECITKSVSFLPRNKEELERTIKNIQGTITGDILPRLHKCLASTTKRE
EEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMETNLPSILLKVCALLKNRAQEIR
DIARSTLAKIIEDLGVRYLQYILKELRSTLVRGYQVHVLTFTVHMLLQGLTNKLQVGNLD
SCLDIMIEIFNHELFGAIAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKLIL
PLKEILQNTTSLKLARKVHETLRRIIAGLLVNQEMTAESILLLSYGLVSENLPLLTEKEK
NPATPAPDPRLPPQSCLLLPPTPVRGGPKAAVSKKTNMHIFIESGLRLLHLSLKTSKIKS
SSEHVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWILRFPLPSIETKAEQLTKHLFLL
LKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYHITEKQLQVLLAYAEEDIYDTSRQA
TAFGLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPVRVQCRQVFLKYILDYPLGDKLR
PNLEFMLAQLNYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSAMC
KKMASMAIKSLLSKISLEKKDWLFSMVTTWFGAKKSLNRQLAALVCGLFVESEGVTFDRR
LGTVLPVIEKEIDPEKFIDIMEETEEKAADRLLFSFLTLISKXIKECNIIQFTKPSETLS
KIWSHVHSHLRHPHNWVWLTAAQIFGLLFASCQPEELTSKWNVKKTKKKLSEPVAIRFLT
SDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPDSGDKQDDMQEDM
DEQEVSGDGMVREDIEELRACADEKEEHSKPATLLWLIQKLSRIAKLEAAYSPRNPLKRT
CILKFLGAIAMDLGTDKVKPYLPVIIAPLFRELNSTYSDQDPLLKNLSQEIIELLKKLVG
LESFSLAFASVQKQANEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEFLR
PGYKAKRRKSHSLKDLAMVE
NT seq
8343 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcccgtttcccacaagaccgagaacacgcatcggtttcttacatttgct
gaacggctgggaaatgtgaatatcgatattattcaccggattgatagaactgcaagctat
gacgaggaagttgaaacctacttttttgagggtctgctaaagtggagagaattgaacctt
acagaacatttcgggaaattttataaagaagttattgacaaatgccaatcattcaatcag
ctggtctatcatcaaaatgagatcgttcagagtttgaagattcacctgcaaatcaagaac
agttatgcctatcaaccccttttggatttggttgtacagttggcacgggatctgcagatg
gacttctatccccattttcaggatttttttctgactatcacctcaatcctggagactcag
gacacagagttattagaatgggcttttacctcgctgtcatatctttacaagtacctgtgg
agactgatggtgaaagacatgtccagtatatacagcatgtatagtacgctcctggctcat
aaaaaactacatataagaaattttgctgccgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcactattcaatttaatgtttcttgatcttgatgaacatccagaaaaa
gtagaaggagttggacagttgctctttgaaatgtgcaaaggagtcagaaatatgtttcac
tcctgtacagagaaggcagtgaagctaattttgcaaaagttaggaccagttactgaaaca
gaaactcaacttccatggattttagttggaggaacacttaaaaatatggtcaaatccact
gcaatctacatctgcaaggaacattttggtatattttttgaatgtttgcaagactcgctt
ctggatctacataaaaaagtaaccaaaactaactgtgatgaaagttctgaacagattaaa
aggttgttagaaacatatctgatacttgtaaaacatggaaatggatcaaagataaccaaa
cctattgatgtttgtaaggtattgtctcaaacattacaaatagcgcatctctccacatct
tgccgggagaccctcttggatgtaatttctgctttgatcctaggtgaaaacgtttcctta
ccagagaccgtcatcaaagaaaccatagaaaaaatttttgcaagcagatttgaaagacat
ttaattttggatttttcggaagtcatgtttgctatgaagcagtttgagcagctttttcta
cccagctttctcctgtatatcaaggattgcttcctgatagatgacgctgcggtcgaagat
ggagctctggccattttggccaagctcattctgaacaaagcagcacctcccactgctggc
tccatggcgattgagaagtatcctctgcttttctcacgacacacggtgggatcctgtgta
aggcagaagaccagatccaagggaggcaaggaacagatctcagtattggatcatctttta
tctataattcagttacttccaaataaagatactacttatctttcacgttcttgggcagcc
cttgttgtgttacctcatgttagacccctggagaaagagaaggtgataccactagtcacg
tgcttcatcgagtcactcttcaggactgttgacagagggagctttggaaaaggaagctta
tttgttctttgtcaagctgtaaatactctgctaagtttggaagaatcttctgaacttctt
catttggttcctgtggaacgtgtgaagaatttagtatcaatgtttcctttggagccctct
gtgttactgttggctgatctctattatcagagattgtccttatgtggctgcaaagggcca
ctttcggaggaagctttaatggaattgtttcccaagttacaagcaaacatttcaactggc
atatccaagattcgccttttgacaataaggatcctaaaccacttcgaagttcgacttcca
gaattaatggaggatgacgagctctcaaagcgtcagtctgtctttgctatattacgccag
gcagaacttgtcccagcaactgtgaacgattacagagagaagcttctttatttgagaaaa
ctcagacatgatgtggtgcagactgcagtccccgatgggccattacaggaggtgccactt
cgttatttgttaggcatgctgtatgttaacttcagtgctctctgggatcctgttattgag
ctcataagttcttatgcacatgaaatggaaaataagcaattttggaaagtctactatgaa
catctagaaaaagcagctacacatgctgagaaagagctgcagaatgacacaagagatgag
gagacgtccattggagatggaagctgggagcagactcaggaaggagacattggagccctt
tatcatgagcagttctcgttgaaaaccgaccttcaggaaagactggaccataccaatttt
cgatttttgctctggcgaggtctggcaaaattcccagaaagggtagagcctcggtccagg
gaactttccccgctttttttgagatttatcaacaatgagtattacccagcagatctgcaa
gttgcaccaacccaggatctgcaaagaaagagcaaagggctggcggcggaggagatggaa
gaggaacctgctgccagagacgatgaagagctggaggaagagctggtgccccaagatgaa
ccgtcccagaagaaaaagacaagaagagctgcggcaaagcaattaattgctcacctgcaa
gttttctctaagttttcgaatcctcgagccttatatctggaatccaaactatatgagtta
tatcttcagttattgctccaccaagatcaaatggtgcaaaaaataaccctggattgcata
atgacatataaacatccacatatcctcccttacagggaaaacttacaaagattgcttgaa
gacagaagctttaaggaagagatagtgcattttagcatttctgaagataatacagtagtg
aaaacagcccaccgagtggatctgtttcctattctgatgagaattttgtatggccgaatg
aagaataagactggcagtaaaactcaggggaaatctgcttccggcacccgcatggccatt
gttctgaggtttctcgctgggacccaacccgaggagatccagatattcttagacctgctg
tttgaacccgtgaagcacttcaagaatggcgaatgccattctgcagtcatccaagcagta
gaagatttggatttgtctaaagttcttcctttaggtcgtcagcatggtatcttaaatagc
cttgagatagtactgaagaacattagtcatctgatcagtgcttacttaccaaagattttg
cagatattgctctgcatgacagcgactgtatcacacatccttgatcaacgagaaaagata
cagctaaggtttattaacccactgaaaaatttaagacgtcttggaatcaaaatggtaact
gacatctttttggattgggagtcctatcagttcagaacagaagaaattgatgctgtgttt
catggtgcagtttggccccagatcagcaggcttggatctgagagtcagtattctcctact
cctctgctgaaactaattagtatctggagcagaaatgcaagatatctccctttcctggct
aaacagaaacctgggcacccagaatgtgatatcctgaccaatgttttcgcaattctctca
gcaaagaatctctctgaggccacagctagtattgtgatggagatagccgatgaccttctt
agccttccagattttgaacccacagacacagttttaagcttgccagtaactggatgcgta
tacacagagagcacggatgagtctatcacaataggaggacgattaattctacctcatgta
cctgcaattctccaatatctcagcaagaccacaataagtgccgaaaaggtgaaaaagaag
aagaacagagcacaagtcagtaaagaactcggcattctttcaaagatcagcaagtttatg
aaagacaaagaacaaagttctctgctcgtcacgctcctccttcctttcctccatcgtggt
aatattgctcaggacacagaggttgatatcctggtgacaatacaaaacctgttaaaacac
tgtctggagcccacaagcttcctcaagcctctagcaaaactcttctcagttattaagaac
aagttgtcaagacaattgctttgtacagttttccagactctttctgattttgagagtgga
ttaaaatatattactgatgttgtcaagcttaacgcctttgatcagagacatcttgatgat
atcaactttgacgttcgcttctcagcattccaggtcatcacctcttatattaaagagatg
caaactgtggatgttaactacctaattccagtcatgcataactgtttctataacatggag
ttaggagacatgtctttaagtgataatgcaagcatgtgcttgatgactgtcatcaaaaag
cttgctgccttggatgtcacagagaaagaatatagagaagtcattcatcgttcactcctg
gagagactgaggaaggggttgaagagccagacagagagtgttcaacaggattataccacg
ctgctttcctgtttaattcaaacctttccaaatcaaccagaatttaaagacttggtgcag
cttaccgattgccatgatccagaaacagacttctttgagaatatgaagcacattcagatc
cacagaagagcaagagccttgaagaaactggcaaaacaactaacggaaggcaaaattgtg
ctgtcttctaaatctcttcagaactacatcatgccttatgccatgactccagtttttgat
gagaaaatgctcaagcatgaaaatataaccattgctgccacagaggttattggagctatt
tgcaaacatctctcttggtcagcatatatatattacttgaagcatttcattcacgtctta
cagacaggacagattaatcaaaagttaggtgtcggtttgctagtgatagtgttagaagca
ttccactttgaccacaaaactcttgaagaacaaatgagaaaaattcagaatgaagaaaac
acagtagaagtgactgaattgcccgagcacgatgccatggaattagagcatacagatgag
gacgagaaggaagatgaagatggatgtgagactttgtcatacaacaaggaagaactggaa
aaccctgacccggctgaagggacttcagccaaggaatccgagtgtatcacgaagtccgtc
tctttccttcctcggaataaggaagaattggagagaacaattaaaaatattcaaggaacc
ataactggggacatcctacccaggctccataaatgcctggcctctacgactaaaagggaa
gaagagcacaagctcataaaatcaaaggttgtgaatgatgaggaagtggttcgagttcct
ttagcttttgccatggttaaactaatgcagtcccttccgcaagaagtcatggaaaccaat
ctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaaatcaga
gacattgcacgcagcactctcgcaaaaataatagaggatctgggtgtgcgttacctacag
tatattttaaaagaattacggagtacccttgtccgtgggtatcaggtccacgtgctaact
ttcactgttcacatgttgctgcaaggcctcaccaacaagctgcaagttgggaatttagac
tcttgtttggatataatgattgagatctttaaccatgagttgtttggtgccattgctgaa
gagaaggaagtaaagcagatcctctccaaagtcatggaggcacgaagaagcaagagttat
gactcttatgaaatcttgggcaagtttgtaggaaaagatcaggttacaaaacttatcctt
ccactaaaagagatcttgcaaaacaccacaagtttaaaactggcccggaaagttcatgaa
accttacggcgaatcatagcaggattacttgtaaaccaggaaatgacagcagaatccatt
ctgttgcttagttacggtctggtcagcgaaaatctccccctgttaacagagaaagaaaaa
aatccagccacccctgcaccggatccacgtctgccaccccagagctgtcttctgctcccc
ccaactccagttcgaggtggaccaaaagctgccgtgagcaagaaaaccaacatgcacata
tttattgagtctgggcttcggctgttgcatcttagtctgaagacttccaagatcaagtct
tcaagtgaacatgttctagaaatgttggatccttttgtgtctctgctcatagactgcctg
ggctccatggacgtgaaggtgatcacaggtgccttacagtgcctcatctggatcttgagg
ttccccctgccttccatagaaacaaaagcagagcagctaacgaaacaccttttccttctg
ctgaaggattatgcaaaacttggggctgccagaggccagaacttccacctggtggtcaat
tgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcatatcacataactgaaaag
cagcttcaggttctgctagcatacgctgaagaggacatttatgatacttcaagacaagcc
actgcatttggtcttctgaaggccattttatcaagaaagttgttggtcccagaaatcgat
gatgtcatgcggaaagtatccaagttggcaatttctgcacaaagcgaacctgtcagagtc
cagtgcagacaggtttttctgaaatatattctcgattatcctctgggtgacaaattgaga
ccaaacttggaattcatgcttgctcaactgaattatgaacacgagaccgggagagagtct
gccttggaaatgatcgcttacctctttgacacattccctcaggggctgctccacgagaac
tgcggaatgttctttattcctctttgtctgatgatggtgaacgatgactctgccatgtgt
aaaaagatggcatccatggcaatcaaatccttactcagcaaaatcagccttgagaaaaaa
gattggctctttagtatggttaccacctggtttggggcaaagaagagcttgaatagacaa
ttagctgccctcgtctgtggcttgtttgtggaaagtgaaggagtcacttttgacagaaga
cttggaactgttctccctgtgattgaaaaggaaattgatcctgaaaaatttatagatatc
atggaagaaactgaagagaaagctgcagatcgccttctgtttagttttcttacactgata
agtaaanctatcaaggaatgtaatattattcagtttaccaagccctctgagactttgagt
aaaatctggagtcacgtgcactctcacctgagacacccgcacaactgggtgtggctcact
gcagcccagatttttggactgctcttcgcctcttgccaaccagaggaacttaccagtaaa
tggaatgtcaaaaaaactaagaagaaactctcagaacctgtagcaatcaggttcctaaca
agtgaccttgaccaaaagatgaaaagtatctccctagcctcttgccatcagttgcattcc
aaattcttggatcaatctctaggagagcaggttgttaagaatttgttgttcgtagccaaa
gtcttgtatttactggaacctgattctggggataagcaagatgacatgcaagaagacatg
gacgaacaggaagtttcaggtgacggcatggtcagagaggatatagaagaactcagggcg
tgtgcagatgagaaggaagagcacagcaagccagccacactgctgtggctgatccagaag
ttgtcccggatcgcaaagctagaagctgcttattcacctagaaaccccttaaagagaaca
tgcatcttgaagtttctcggagctatagcaatggatcttggaacagacaaggtgaagccc
tatctcccagtgatcatagctcctctgttccgagaactgaacagcacctattcggaccag
gatcctttgctgaagaatctatcccaggaaatcatagaattactgaaaaagctggttggg
cttgagagcttttcattagcctttgcctctgtacagaaacaagctaatgagaaaagggca
ctccgaaaaaagaggaaggctttggagtttgtaaccaatcctgatatcgccgccaagaaa
aagctcaagaaacacaaaaataaaagtgaggcaaagaagagaaagatagagttcctgcgt
ccaggatataaggccaagagacggaagagccacagcctgaaagatctggcaatggtggag
taa
DBGET
integrated database retrieval system
