Vicugna pacos (alpaca): 102542277
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Entry
102542277 CDS
T08098
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X2
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vpc03037
]
102542277 (USHBP1)
Cilium and associated proteins [BR:
vpc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102542277 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
HOOK
RVT_N
Motif
Other DBs
NCBI-GeneID:
102542277
NCBI-ProteinID:
XP_006199149
UniProt:
A0A6I9I0V0
LinkDB
All DBs
Position
22
AA seq
702 aa
AA seq
DB search
MSARATRPRSRRGRHALPGELDPVAESSEEAEAANRSSELGPVPSQDSCKPELLGPEAEA
KGQSLESRTDKEVDGDSSRGPAVAPEGPHEPVEEAHQAPGAAPRDGETLLSGFGAPDVFQ
TLQQALSSLEAAAAAWRRQPPSCPGPTEAKDRSEGEPRPCLEQEGAGGCQREAARLAERN
AWLRLALGSREDELNRTQSSLKVIQAEKKMLQREVQELQDSLMRLEPFPSPSCDQARGSG
SGSSSSGVDGETWGTQDPFSLAHPLLRRLQSDSSTQILGPLPTQPLAPEMHIIETQMGQL
RGNIEKLKCFNRLLSAVLQEYKGRCEGLSMQLGQREAEATALRLALQYSEHCEEAYGALL
TLREADSRAGEEAFMGDLEVAEKEAQRLLVQEKAAMDGGTLQDPHPSPEGSSVDRPTPQE
VAAQLQGYVQRLQERRALVKIPPEPGPPLAPISTVPHAEAMVQAILGTQPGPALPRLEKM
QIQQDLAATRETLADLMLRLQLVRREKRALELREAALRAQGPAHVLLLEQLQWEKAQLLT
GGASSGGDSSGGGSSGDEEEWSQGPPAVPGGSRGTDGSQGGKVQDPGDLAQELSASLTRA
LSLREQLQSLREELEEVAQKGRARRAQSTELNSDLCRAHSALVMAFRGAHRKQEEQRRKL
EQQVALMEARQAEELAVLEATARALGRPRLPCRPPRPGETFL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccagggccacacggcccagaagccggcgagggaggcacgctctgcccggtgag
ctggaccctgtggcagagagttcagaggaggctgaggcagccaacaggagctctgagctg
ggcccggtgccatctcaggatagctgcaagccagagttgctgggccctgaggcagaggcc
aaagggcagagcctggagagcaggactgacaaagaagttgatggggactctagcagggga
ccagccgtagcccccgaggggccccatgagcctgttgaggaagcccaccaggccccaggg
gcagccccacgagatggggagactctcctctctggatttggagcccccgatgtgtttcag
actctccagcaggctctgagctccctggaggcagccgctgctgcctggcgccgccagccc
ccaagctgtcctgggccaacggaggcaaaggacagaagcgagggggaaccgaggccctgc
ttggagcaggagggggctgggggttgccagcgggaggcagcccggttggctgaaaggaat
gcctggctgcgtctggccctgggcagccgggaggacgagctgaaccgcacacagtcttca
ctgaaggtcattcaggctgagaagaagatgctgcagagagaggtccaggagcttcaggat
tccctgatgaggctggagcccttcccttctccctcctgtgaccaagcacgaggctcaggc
agtggttccagcagctctggggtagacggagagacctggggcactcaggatcccttctcc
ctggctcaccccctactccggcgcctccagagtgattccagcacccagatactcggacct
ctccccacccagccccttgctcctgagatgcacatcatagaaacccagatggggcagctc
cgagggaacattgagaagctcaaatgcttcaaccgtctgctgtcggctgtgctccaggaa
tacaagggccgatgtgagggcctcagcatgcagctgggccagcgggaggctgaggccact
gctctgcgtctggccttgcagtatagtgaacactgtgaggaggcatatggggccctcctc
actcttcgggaggcagactcaagagcaggagaagaagccttcatgggtgacttggaggtg
gctgagaaggaagctcagaggctgctagtgcaagagaaggctgccatggacggagggaca
ctgcaggatccacatccaagccccgagggcagcagcgtggataggcccacaccacaggag
gtagctgcccagctccagggctatgtccagcgtctccaggagcgccgtgctctagtgaag
attcccccagagcctggtcccccattggcacctatatccactgtgccccacgcggaagcc
atggtgcaggccattctggggacccagcctggcccagccctgccccggctggagaagatg
cagatccagcaggacctggcggccacacgggagaccctggcagacctgatgctgcggcta
cagctggtgcggcgagaaaagcgggctctggagctgcgggaggctgccctccgagcccag
ggtccagcccatgtgctcctgctggagcagctgcagtgggagaaggcacagctcctgact
ggtggggccagcagtggcggagacagcagtggaggtgggagcagtggggacgaggaggag
tggtcccagggccctcctgctgtccctggtggcagcaggggtactgatggaagccaaggg
ggaaaagtgcaggacccaggggacctggcccaggaactatcagcgtcactcacccgggct
ctgagcctgcgggagcagctgcagtctctgcgggaagaactagaagaggtggctcagaag
gggcgagccagacgtgctcagagtactgaactgaacagtgatttatgcagagctcacagt
gccctggtcatggcattccgaggtgcccaccggaagcaggaagagcaacggcggaagctg
gagcagcaggtggcactaatggaagcccgacaggcagaggagctggcagtgctagaagcc
acagcaagggccctggggaggcccagactgccctgccgacctccccggccaggggagacc
tttctgtag
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