Vicugna pacos (alpaca): 102542381
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Entry
102542381 CDS
T08098
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc01524
Platinum drug resistance
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102542381 (TOP2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpc03032
]
102542381 (TOP2B)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102542381 (TOP2B)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
102542381 (TOP2B)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Topoisomerases
102542381 (TOP2B)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
102542381 (TOP2B)
Centrosome formation proteins
Centriole proteins
102542381 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
DUF7180
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
102542381
NCBI-ProteinID:
XP_006205373
UniProt:
A0A6I9I7C4
LinkDB
All DBs
Position
1
AA seq
1542 aa
AA seq
DB search
MWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWN
NGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVE
TACKEYKHSFKQTWLNNMMKTSEAKIKHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMT
RRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVC
LTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHI
WVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQ
TQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDR
YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMT
DQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKK
HIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDD
RKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVD
GFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNN
INLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDNQRVEPEW
YIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQ
ELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEY
HTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILK
EFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQR
GYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEE
LIKQRDAKGREVSDLKRKSPSDLWKEDLAAFVEELERVEAQEREDVLAGMAGKAIKGKVG
KPKVKKLQLEETMPSPYGRRVVPEITAMKADASKKLLKRKKGDLDTTTVKVEFDEEFGGT
PVEGTGEEVLISSAPINKGPKPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNPWSDDESK
SESDLEETEPVVIPRDSLLRRAAAERPKYTFDFSEEEDDDADDDDDNNDLEELKVKASPI
ANDGEDEFVPSDGLDKDEYTFSPGKSKATPEKSSHDKKSQDFGSLFSFPSYSQKSEDDSA
KFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKGKPSLDTTPKPKRTPKQKKVETVNSD
SDSEFGIPKKTAAPRGKGRGAKKRKASGSENEGDYNPGRRTSKPPSKKPKKTSFDQDSDV
DLFPSDFTSEPPSLPRSGRARKEVKYFADSDEEDDVDFAMFN
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatatgatgaagatgtaggaatgaattgcagagaagttacctttgtgccaggt
ttatacaagatctttgatgaaattttggttaatgcagctgacaataagcaaagggataag
aacatgacctgtattaaagtttctattgatcctgaatctaacattataagcatttggaat
aatgggaaaggcattccagttgtagaacacaaagtagagaaagtttatgttcctgcatta
atttttggacagcttttaacatccagtaactatgatgatgatgagaaaaaagtaacaggt
ggtcgcaatggttacggtgcaaaactttgtaatattttcagtacaaagtttacagtagaa
actgcttgcaaagaatacaaacatagttttaagcagacatggctgaataatatgatgaag
acttctgaagccaaaattaaacattttgatggtgaagattacacatgcataacattccaa
ccagatctggccaaatttaagatggaaaaacttgacaaggatattgtggctctcatgacc
agaagagcttatgatttggctggttcatgcaaaggagtcaaggttatgtttaatggaaag
aaactgcctgtaaatggctttcgcagttatgtagatctttatgttaaagacaaactggat
gaaactggagtggccctgaaagttattcatgaacttgcaaatgaaagatgggatgtttgt
ctcacattgagtgaaaaaggattccagcaaatcagctttgtaaatagtattgcaacaaca
aaaggtggacggcatgtggattatgtagtagaccaagttgtcggtaaactgattgaagta
gttaagaaaaagaacaaggctggtgtatcagtgaaaccatttcaagtaaaaaaccatata
tgggtttttattaattgccttatcgaaaatccaacttttgattctcagactaaggaaaac
atgactctgcaacccaaaagttttgggtccaaatgccagttgtcagagaagttttttaaa
gcagcctctaactgtggcattgtagagagtatcctgaactgggtgaaatttaaggctcag
acacagctgaacaagaagtgttcctcagtaaagtacagtaaaatcaaaggtattcccaaa
ctggatgatgctaatgatgctggtggcaagcattcccttgagtgtacactgatactaaca
gaaggagactctgccaaatcgttggctgtgtctggattaggtgtgattgggagagacaga
tacggagtctttcccctcagggggaaaattcttaacgtacgggaagcttctcataaacag
atcatggaaaatgcagaaataaacaatattatcaaaatagttggtctacagtacaagaaa
agttatgatgatgcagaatctctgaaaactctacgctatggaaagataatgattatgact
gatcaggatcaagatggttctcacataaaaggcctgcttattaatttcatccatcacaac
tggccatcacttttgaagcatggtttccttgaagagttcattactcctattgtaaaggct
agcaaaaataagcaggaactttccttctacagtattcctgaatttgatgagtggaaaaaa
catatagaaaaccagaaagcctggaaaataaaatactacaaagggctgggtaccagtaca
gctaaagaagcaaaggagtattttgctgatatggaaaggcaccgcatcttatttagatat
gctggtcctgaagatgatgctgccattaccttggcattcagtaagaagaagatcgatgac
agaaaagaatggttaacaaatttcatggaagatcggagacagcgtaggttacatggctta
ccagagcaatttttatatggtacagcaacaaaacatttgacttacaatgatttcatcaac
aaagaattgattctcttctcaaactcagacaatgaaaggtctataccatctcttgttgat
ggctttaaaccaggccaacgaaaagttttatttacctgttttaagaggaatgataaacgc
gaagtgaaagttgcccagttggctggatctgtggctgagatgtccgcttaccatcatgga
gaacaagcattgatgatgactattgtgaatttggctcaaaactttgtgggaagtaacaac
attaacttgcttcagcctattggtcagtttggaactcggcttcacgggggcaaagatgct
gcaagtcctcgttatattttcacaatgttaagctctctagcaagactgctttttcctgct
gtggatgacaacttgcttaaattcctttatgatgataatcaacgtgtagagcctgagtgg
tatattcccataattcccatggttttaataaatggtgctgagggcattggtacaggatgg
gcttgtaaactacccaactatgatgctagggaaattgtgaacaatgtcagacgaatgctg
gatggcttggatcctcatcccatgctgccaaactacaaaaactttaaaggaactatccaa
gaacttggtcaaaaccaatatgcagtcagtggtgaaatatttgtggtggatagaaacaca
gtagagattacagagcttccagttagaacttggacacaggtgtacaaagaacaggtttta
gaacctatgctaaatggaacagataaaacaccagcattaatttctgattataaagaatat
catactgatacaactgtgaaatttgtggtgaaaatgactgaagagaaactagctcaagca
gaagctgctggattgcacaaagtttttaaacttcagactactcttacttgtaattccatg
gtactctttgatcatatgggatgtctgaagaagtatgaaactgtgcaagacattttaaaa
gaattctttgatttacggttaagctattatggtttacgtaaagaatggcttgtaggaatg
ttgggagcagaatctacaaagcttaacaatcaagcccgtttcattttagagaagatacaa
gggaaaattactatagagaataggtcaaagaaagatttgattcaaatgttagtccagaga
ggttatgaatctgacccagtgaaagcctggaaagaagcacaagaaaaggcagcagaagag
gaagaaacacaaaaccagcatgatgatagttcctctgattcaggaactccttcaggccct
gattttaattatattttaaatatgtctctgtggtctcttactaaagaaaaagttgaagaa
ctgattaaacagagagatgcaaaagggagagaggtcagtgatcttaaaagaaaatctcct
tcagatctttggaaagaagatttagcagctttcgttgaagaactggagagagtggaagcg
caagaacgagaagacgttctagctggaatggctggaaaagcaataaaaggtaaagttggc
aaacctaaggtgaagaagcttcaactggaagagacaatgccctcaccttatgggagaaga
gtggttcctgaaattactgctatgaaggcagatgccagtaaaaagttgctgaagaggaaa
aagggcgatcttgataccacaacagtgaaagtggaatttgatgaagaattcggtgggaca
ccggtagaaggcacaggagaagaggtgctgatctcgtcagcgcctataaataaaggcccc
aaacccaaaagggagaaaaaggagcctggtaccagggtgagaaaaacacccacatcttct
gggaaacccagcgcgaagaaagtgaagaaacggaatccctggtcagatgacgaatccaag
tcagaaagtgacttggaagaaacagaacctgtggttattccacgagattctctgcttagg
agagcagctgctgaaaggcctaagtacacgtttgatttctcagaagaagaggatgatgat
gctgatgatgatgatgacaataatgatttagaggaattgaaagttaaagcatctcccata
gcaaatgatggagaagatgaatttgttccttcagatggccttgataaagatgaatataca
ttttcaccaggcaaatcgaaagctactccggaaaagtcttcccacgacaagaaaagtcag
gattttgggagtcttttctcatttccttcatactctcagaagtcagaagatgattcagct
aaatttgacagtaatgaagaagattctgcttctgttttttcaccatcgtttggtctgaaa
caaacagaaaaagttccaagtaaaacagtagctgctaaaaagggaaaaccgtctttagat
acaacccctaagcccaagagaactcccaagcagaagaaggtagagactgtgaactctgat
tcggactccgagttcggcattccaaagaagaccgcggcgccgagaggtaaaggccgaggg
gcaaagaaaaggaaggcatctggctctgaaaatgaaggtgattataaccctggcaggaga
acttccaaaccaccaagcaagaaaccgaagaaaacatcttttgatcaggattcagatgtg
gacctcttcccatcagacttcacttctgaacccccctctctgccacgcagcgggcgggct
aggaaagaagtaaaatacttcgcagactctgacgaagaagatgatgttgattttgcaatg
tttaattaa
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integrated database retrieval system