Vicugna pacos (alpaca): 102542396
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Entry
102542396 CDS
T08098
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpc03009
]
102542396 (DDX55)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102542396 (DDX55)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
Pre-60S particles
Helicases
102542396 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
102542396
NCBI-ProteinID:
XP_006209605
UniProt:
A0A6I9IG36
LinkDB
All DBs
Position
32
AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKAFPQFSQILWIGG
RNPGEDVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQKTPS
RLENYYMVSMGRSRWNRCVHALDSNGSKPSRPSCSTCACVEYYGKALEALVKGVKIMCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMKLQKNTADLLPKLKSMALADRAVFEK
GMKAFVSYVQAYVKHECSLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN
TDTIPFKDKIREKQRQKLLEQQRKEKTENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRKK
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKRSVKTADLGTSDAEDDG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggttcctgggagtcgctgcctgtgccgctgcacccgcgggtg
ctgggtgcgctgcgggagctgggtttcccgtacatgacgccggtgcagtctgcaaccatc
cctttgttcatgaaaaacaaagacgttgccgcggaagcggtcacaggtagtggcaaaaca
ctcgctttcgtcatccccatcctggaaattctcctgaggagggaagagaagttaaaaaag
agtcaggtcggcgccataatcatcacacccacgcgggagctggctattcagatagacgag
gtcctgtcccacttcacgaaggctttcccacagttcagccagatcctctggattggaggc
aggaatcctggagaggatgttgcgaggtttaaggagcacggtggaaacatcattgtggcg
acccccggccgcctggaggacatgttccgaaggaaggccgagggcctggacctggccagc
tgcgtcaggtccctggacgtcctggtgttggatgaagcggacagacttctggacatgggg
tttgaggccagtataaacaccatcctggagtttttgccaaagcagaggagaacgggcctt
ttctcggccactcagacgcaggaggtggagaacctggtgagagcaggcctgcggaacccc
gtgcgcatctcggtgaaggagaagggcgccgcggccagcagcacccagaaaaccccttcc
cgcctagagaactactacatggtgagcatggggcgttctcgctggaacagatgtgtgcat
gctttggactccaatggctctaagccctctcgcccctcttgcagcacgtgcgcctgtgtg
gagtactatggaaaggccctggaggccctggtgaagggcgtgaagataatgtgcattcac
ggaaagatgaaatacaagcgcaacaagatcttcatggagttccgcaaactgcagagtggg
atcttggtgtgcactgacgtgatggcccggggaatagacattcccgaagtcaactgggtg
ctgcagtacgaccctcccagcagtgcaagcgcctttgtgcatcgctgtggccgcacagcc
cgcatcggccacggcggcagtgcgctagtgttcctcctgcccatggaagagtcgtacgtc
agcttccttgccattaaccagaaatgccccctgcaggagatgaaactccagaaaaacaca
gcggacctccttccaaagctcaagtccatggccctggctgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcatacgtccaggcttatgtgaagcacgaatgcagcctcatc
ttcagattaaaggatcttgattttgctagtcttgctcgaggttttgccctgctgaggatg
cccaagatgccagagctgagaggaaagcagtttccagatttcgtgcccgtggatgtcaat
acagacaccattccatttaaagataaaatcagagaaaagcagaggcagaagctactggag
caacaaagaaaagagaaaacagaaaatgaagggaggaaaaagttcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggaaaagaagaagaaaatgaatgaaaaaaggaaaaag
gaagagggttctgacattgaagatgaggacatggaggaactgcttaatgacacaaggctc
ttgaaaaagtttaaaaaaggcaaaattactgaagaagaatttgagaaggggctgttgaca
agtggcaaaagatcagtcaagacagcagatttggggacgtcagatgcggaggatgacggc
tga
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