Vicugna pacos (alpaca): 102542458
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Entry
102542458 CDS
T08098
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102542458 (SYNPO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
UPF0492
Motif
Other DBs
NCBI-GeneID:
102542458
NCBI-ProteinID:
XP_006204684
LinkDB
All DBs
Position
3
AA seq
877 aa
AA seq
DB search
MLGPHLPPPPLGPSEGRSTPCTFGIPDGSYRCLALEAEESGGEEGLLGEAGLTDLEEDRV
ASRSGDNACRATQGAPQLPRALGLQPPSCSREARGDSQHDDRASQDWDTMKARQVMTASL
SPSLGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESHGQRGQKPSQESLRVTPASPTGHAPGLSLSATSVPKPGPPRNPNCQSSDIRVP
GHSMEGCSEEASLLRHLEKMASEEDTTLITPASNSNHNLPATDVNQNLPATVTPQSLPLS
SVQQNSSEAQLPPNGTVPDFKPSTLCAGGQPQEPAAEVRSSTLVIDKVSAPSTTTSAFSR
EVTPISSSGPPAPDFMSSSLLIDVQLGAPVVSAEQEMSGQAATTMPTKLYSEVHLTLAKP
PSVVNRTARPFGIQASGSTSQMERSPMIERRHLGEKAPATQPPSIADRSPRPQRHVMSHS
PMLERRPMAQRSPALERRPLGAFTPPPTYAETLSTAPLASRVRSPPSYSALYPCSDPKPS
HLRGQVVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQG
EAGVEEEPFALGAEASNFQQEPTARDRASPAGAEETLPEWASCLKSPRIQAKPKPKPNQN
LSEASGKGAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGGFRVAS
RSPARTPPASFYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKASPRAASPRAA
SPAKPSSLDLAPSLPKAALPPSPALPRPSRNSPGLYTSPGQDGLQPTTVSPTYSSDISPV
SPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcccccacctcccacccccgcccctgggacccagtgaaggcaggtctaccccc
tgcacctttgggattcctgatgggagctacaggtgtctggccttggaggccgaggagagc
ggcggtgaggagggcctgctgggagaggcagggctcacggacttggaggaagacagggtg
gccagcaggagcggggacaatgcctgcagagccacccaaggggcaccacagcttcccagg
gccctgggcctccagccacccagctgttccagggaggcacgaggggattcccagcatgac
gacagagccagccaggactgggacacgatgaaggcccggcaggtgatgacagccagcctc
agccccagccttgggcccagggttgcccagaaaccagcattgggccggagcaccagcctc
accgagaaggatctaaaagaggccaaggcgaggagccagcagatcgcagcccagctgacc
acccctcccagctccaactcccgcggagtccagctcttcaacaggcgccggcagagggtg
aatgagttcaccttggagagccacggccagaggggacagaagcccagccaggagtccctc
cgagtgacccctgccagccccacaggccatgccccagggctcagcctgagtgccacctca
gtccctaagccaggccctccgagaaaccccaactgccagagctctgatataagggtccct
ggtcacagcatggagggctgctcagaggaggccagcttgctgcggcacctggagaagatg
gccagtgaggaggacaccacgctcatcactccagcttctaacagcaaccacaacctgcca
gccacagatgtcaatcagaacctaccggcaactgtcaccccgcagagcctgccactttct
agtgtccaacagaattcttcagaagcacaactcccgcctaatggcacagtgccagatttc
aaacccagcaccctgtgtgctggtgggcagccccaggagccagctgcagaggtgagatcc
agcaccctcgtaattgataaggtatcagctccatctaccaccaccagcgccttctccaga
gaagttactcccatctccagctccgggcccccagccccagatttcatgtccagctccctg
ctcatcgatgtccagctcggcgccccagtggtgtcagcagaacaagagatgtccgggcag
gcagccacaaccatgcccaccaagctgtacagtgaggtccacctcacgctggccaagccc
ccatccgtggtcaacaggacagccaggccctttgggatccaggcttcagggagcaccagc
cagatggagcggagccccatgatagagagacgacatcttggggagaaggccccagctacc
cagccccccagcatagcagaccggagccctcggccacagagacacgtaatgtcccacagc
cccatgctggagaggaggcccatggcacagcgaagccccgccttggagagacgccccttg
ggagccttcaccccgccccctacctatgctgagaccttgtccacggcccccctggcttcc
cgggttaggtctcccccctcttactctgccctgtacccctgctccgaccctaagccttct
catctaaggggccaggtggttcctgccagcaagacaggcattctggaggagtcaatggcc
cgcaggggcagccggaaatccatgttcaccttcgtggagaagcccaaggtgaccccgaat
ccagacctgctggatctggtccagacggctgatgagaagaggaggcagagagaccagggg
gaggcgggcgtggaggaggagcccttcgcgctgggggccgaggcctccaacttccagcag
gagcccacagcccgggacagggccagccccgcgggcgccgaggagactctccccgagtgg
gcctcgtgcctcaagtcgccgcgcatccaggccaagccgaagcccaaacccaaccagaac
ctctccgaggcctccgggaagggggctgagctctacgcccgccgccagtcccggatggag
aagtacgtcatcgagtcttcgggccacacggaactggcccgctgcccttcgcccactatg
tccctgccttcatcctggaagtactccacgaatgcgcctggtggcttccgagtggcatcc
cgaagcccagctcggaccccgcctgcctccttctaccatggctacctgcctgagaatggg
gtcctgcgcccagagcccaccaagcagccaccctaccagctgcggccctcgctgttcgtc
ctctcacccatcaaggaacctgccaaggcctcgcctagagctgcctcgcccagagccgcc
tcacctgccaagccgagttccctggacctggcacccagcctgcccaaggcggccctcccg
ccgtctcctgccttgcctcggccctcccgcaactcaccgggcctctacacctcccctggc
caggatggcctccagcccactaccgtgagccctacctacagcagtgatatctcccccgtg
tctccctccagggcctggtctccccgagccaagcaggcccccaggccctccttctccacc
cgtaatgccgggatcgaggctcaggtgtggaagccttccttctgcttcaagtaa
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