KEGG   Vicugna pacos (alpaca): 102542458
Entry
102542458         CDS       T08098                                 
Symbol
SYNPO
Name
(RefSeq) synaptopodin
  KO
K21112  synaptopodin
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04530  Tight junction
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102542458 (SYNPO)
SSDB
Motif
Pfam: Calsarcin UPF0492
Other DBs
NCBI-GeneID: 102542458
NCBI-ProteinID: XP_006204684
LinkDB
Position
3
AA seq 877 aa
MLGPHLPPPPLGPSEGRSTPCTFGIPDGSYRCLALEAEESGGEEGLLGEAGLTDLEEDRV
ASRSGDNACRATQGAPQLPRALGLQPPSCSREARGDSQHDDRASQDWDTMKARQVMTASL
SPSLGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESHGQRGQKPSQESLRVTPASPTGHAPGLSLSATSVPKPGPPRNPNCQSSDIRVP
GHSMEGCSEEASLLRHLEKMASEEDTTLITPASNSNHNLPATDVNQNLPATVTPQSLPLS
SVQQNSSEAQLPPNGTVPDFKPSTLCAGGQPQEPAAEVRSSTLVIDKVSAPSTTTSAFSR
EVTPISSSGPPAPDFMSSSLLIDVQLGAPVVSAEQEMSGQAATTMPTKLYSEVHLTLAKP
PSVVNRTARPFGIQASGSTSQMERSPMIERRHLGEKAPATQPPSIADRSPRPQRHVMSHS
PMLERRPMAQRSPALERRPLGAFTPPPTYAETLSTAPLASRVRSPPSYSALYPCSDPKPS
HLRGQVVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQG
EAGVEEEPFALGAEASNFQQEPTARDRASPAGAEETLPEWASCLKSPRIQAKPKPKPNQN
LSEASGKGAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGGFRVAS
RSPARTPPASFYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKASPRAASPRAA
SPAKPSSLDLAPSLPKAALPPSPALPRPSRNSPGLYTSPGQDGLQPTTVSPTYSSDISPV
SPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgctgggcccccacctcccacccccgcccctgggacccagtgaaggcaggtctaccccc
tgcacctttgggattcctgatgggagctacaggtgtctggccttggaggccgaggagagc
ggcggtgaggagggcctgctgggagaggcagggctcacggacttggaggaagacagggtg
gccagcaggagcggggacaatgcctgcagagccacccaaggggcaccacagcttcccagg
gccctgggcctccagccacccagctgttccagggaggcacgaggggattcccagcatgac
gacagagccagccaggactgggacacgatgaaggcccggcaggtgatgacagccagcctc
agccccagccttgggcccagggttgcccagaaaccagcattgggccggagcaccagcctc
accgagaaggatctaaaagaggccaaggcgaggagccagcagatcgcagcccagctgacc
acccctcccagctccaactcccgcggagtccagctcttcaacaggcgccggcagagggtg
aatgagttcaccttggagagccacggccagaggggacagaagcccagccaggagtccctc
cgagtgacccctgccagccccacaggccatgccccagggctcagcctgagtgccacctca
gtccctaagccaggccctccgagaaaccccaactgccagagctctgatataagggtccct
ggtcacagcatggagggctgctcagaggaggccagcttgctgcggcacctggagaagatg
gccagtgaggaggacaccacgctcatcactccagcttctaacagcaaccacaacctgcca
gccacagatgtcaatcagaacctaccggcaactgtcaccccgcagagcctgccactttct
agtgtccaacagaattcttcagaagcacaactcccgcctaatggcacagtgccagatttc
aaacccagcaccctgtgtgctggtgggcagccccaggagccagctgcagaggtgagatcc
agcaccctcgtaattgataaggtatcagctccatctaccaccaccagcgccttctccaga
gaagttactcccatctccagctccgggcccccagccccagatttcatgtccagctccctg
ctcatcgatgtccagctcggcgccccagtggtgtcagcagaacaagagatgtccgggcag
gcagccacaaccatgcccaccaagctgtacagtgaggtccacctcacgctggccaagccc
ccatccgtggtcaacaggacagccaggccctttgggatccaggcttcagggagcaccagc
cagatggagcggagccccatgatagagagacgacatcttggggagaaggccccagctacc
cagccccccagcatagcagaccggagccctcggccacagagacacgtaatgtcccacagc
cccatgctggagaggaggcccatggcacagcgaagccccgccttggagagacgccccttg
ggagccttcaccccgccccctacctatgctgagaccttgtccacggcccccctggcttcc
cgggttaggtctcccccctcttactctgccctgtacccctgctccgaccctaagccttct
catctaaggggccaggtggttcctgccagcaagacaggcattctggaggagtcaatggcc
cgcaggggcagccggaaatccatgttcaccttcgtggagaagcccaaggtgaccccgaat
ccagacctgctggatctggtccagacggctgatgagaagaggaggcagagagaccagggg
gaggcgggcgtggaggaggagcccttcgcgctgggggccgaggcctccaacttccagcag
gagcccacagcccgggacagggccagccccgcgggcgccgaggagactctccccgagtgg
gcctcgtgcctcaagtcgccgcgcatccaggccaagccgaagcccaaacccaaccagaac
ctctccgaggcctccgggaagggggctgagctctacgcccgccgccagtcccggatggag
aagtacgtcatcgagtcttcgggccacacggaactggcccgctgcccttcgcccactatg
tccctgccttcatcctggaagtactccacgaatgcgcctggtggcttccgagtggcatcc
cgaagcccagctcggaccccgcctgcctccttctaccatggctacctgcctgagaatggg
gtcctgcgcccagagcccaccaagcagccaccctaccagctgcggccctcgctgttcgtc
ctctcacccatcaaggaacctgccaaggcctcgcctagagctgcctcgcccagagccgcc
tcacctgccaagccgagttccctggacctggcacccagcctgcccaaggcggccctcccg
ccgtctcctgccttgcctcggccctcccgcaactcaccgggcctctacacctcccctggc
caggatggcctccagcccactaccgtgagccctacctacagcagtgatatctcccccgtg
tctccctccagggcctggtctccccgagccaagcaggcccccaggccctccttctccacc
cgtaatgccgggatcgaggctcaggtgtggaagccttccttctgcttcaagtaa

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