Vicugna pacos (alpaca): 102542531
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Entry
102542531 CDS
T08098
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03015
mRNA surveillance pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102542531
09123 Folding, sorting and degradation
03018 RNA degradation
102542531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102542531
03041 Spliceosome [BR:
vpc03041
]
102542531
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102542531
mRNA cycle factors
Stress granule specific factors
102542531
Spliceosome [BR:
vpc03041
]
Complex C
Other components
Complex C specific factors
102542531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_3
RE_Eco29kI
Motif
Other DBs
NCBI-GeneID:
102542531
NCBI-ProteinID:
XP_006218129
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSASVPHFEMSSLYVGGLHPEVNEAMLYEKFRTAGRILSIRVCRDLVTRRSLGYAYVNFL
LHADTERALNTMNFDIINGKPLRIMWSQRDPSLRKSGVGNIFIKNLAKSIDNKSLYDTFS
AFGNILSCKVVSDENGSRGFGFVHFEKSEAASRAIAKMNGIVLKGSRVFVGQFKPRKERE
TELRAKANIFANVYIKNFGDDVDDKCLKEIFGEFGSVLNMRVMTDESGKSKGFGFVSFEN
FEDAQKAIEGVNGKVLNGNQLYVGRAQNKAERQSELKHKFEQMKQGKLTRCKGATLYVKN
LEDGIDSKWLRKEFSLFGTITNSRVMMEASRSKGLGFVCYTSHEEANKAIRAMNGKTVIT
KPLYVANAQSKEERQARLTKNYMKRMVALKDRGYPTFNTDKMVASSSSGNSMPAVPQPQR
AAGVHSPLKFKVGRPASTQKPVPVCTQGYDMLNVSILASAATQKKLLDEKLVPLIQSIHL
TPTGEISGILLEMDDAEMLYMLKYPEFLRAKIDEFICILQSSQAQDTALRANSTPSI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcggttccacactttgagatgtcctcactgtatgtcggaggcctacatccc
gaagtgaacgaggcaatgctgtatgagaagttccgcactgccgggcggatcctgtccatt
agggtctgccgtgatctggtcactcgccgctccctgggctacgcatatgtgaacttcttg
ctgcacgcggatactgagagggctctgaacactatgaactttgatattatcaatggcaag
ccgctgcgtattatgtggtcccagcgtgacccatcacttcgaaagagcggagtgggcaat
atattcatcaaaaaccttgccaagtctattgataataagtccctttacgatacattttct
gcctttggaaacattctttcttgtaaagtggtatccgatgaaaatggatcaagaggtttc
ggatttgtgcattttgagaaatcagaagccgctagtagagccattgcaaagatgaatggg
attgtgctgaaaggtagccgagtttttgttgggcagtttaaacctcgcaaagaaagggaa
actgaactcagagctaaagcaaacatatttgcaaatgtctacatcaagaattttggagat
gatgtagatgataaatgtcttaaagagatttttggtgaatttggttctgtattaaacatg
agagttatgactgatgaaagtggaaaatccaaaggctttggatttgtgagttttgagaat
tttgaagatgcccagaaagccattgaaggagtgaatggaaaagtccttaatggaaatcaa
ctttatgttggtagagcacagaacaaagcagagagacaatctgaattaaaacacaaattt
gagcaaatgaaacagggtaaacttaccaggtgcaagggtgctaccctttatgtgaaaaat
cttgaagatggtattgacagtaaatggctgagaaaagaattctccctctttggcacaatc
acgaattccagggtcatgatggaggcaagccgcagcaaaggccttggctttgtttgttac
acatctcatgaggaagctaataaagctatcagggcaatgaatggaaaaactgtgatcacc
aaacccctgtacgtggctaatgcacaaagtaaggaggaacgtcaggctcgcctcaccaag
aactatatgaagagaatggtggctctaaaagatagaggttatcctacattcaacactgac
aagatggtagcatcatcatcatcaggtaacagcatgccagcagttcctcagcctcaacgt
gctgcaggtgttcacagtcctctaaaatttaaagtaggaaggccagcatccacccaaaag
cctgtccctgtttgtacacaaggttatgatatgttgaatgtgtctatattggcatcagct
gctactcagaagaagctcttggatgaaaagctggttcctctgattcagtccattcaccta
actccaactggagaaatctctggcatactcttggagatggatgatgctgaaatgctttac
atgctcaaatatcctgagtttctccgtgccaaaattgatgaattcatctgtattctgcaa
tctagccaagctcaagatactgccctgagagctaacagcactcccagtatttga
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