Vicugna pacos (alpaca): 102542547
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Entry
102542547 CDS
T08098
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03030
DNA replication
vpc03410
Base excision repair
vpc03420
Nucleotide excision repair
vpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102542547 (RFC5)
03410 Base excision repair
102542547 (RFC5)
03420 Nucleotide excision repair
102542547 (RFC5)
03430 Mismatch repair
102542547 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpc03032
]
102542547 (RFC5)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102542547 (RFC5)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102542547 (RFC5)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102542547 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102542547 (RFC5)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102542547 (RFC5)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102542547 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102542547 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
TIP49
TniB
AAA_7
nSTAND3
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
IstB_IS21
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
102542547
NCBI-ProteinID:
XP_006204853
UniProt:
A0A6I9I6B3
LinkDB
All DBs
Position
32
AA seq
340 aa
AA seq
DB search
METSAHKQQQQPEAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMAPRLEHVVGEEKVDISEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEETVYTCTG
HPLKSDVASILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcagctcacaagcagcagcagcagcccgaggcagccaagatcaggaacctg
ccctgggttgaaaaataccgtccacagacactggatgatctcatttctcatcaggacatc
ttgagcaccattcagaagtttatcagtgaggaccgcctgccacacctgcttctctatggt
cctcctgggacaggaaagacatccaccatcctagcctgtgctaaacagctatacaaagat
aaggaattcggctccatggtcttggagctgaatgcttcagatgaccgagggatagacatc
gttcgggggccaatcctgagctttgctagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgatgccatgactcaggacgcccagaacgccttgcggaga
gtgattgagaaattcactgaaaataccagattctgcctcatctgtaactatctgtcaaag
atcatccctgccttgcagtcccggtgtacaaggttccgatttggtcccctgactcccgaa
ctcatggctccccgcctggaacacgtcgtaggagaagaaaaagttgatataagtgaagac
gggatgaaagcactggtgactctttccagtggcgatatgcgaagggctctgaacattttg
cagagcaccagcatggcctttgggaaggtgacagaggagaccgtctacacctgcacaggg
cacccacttaagtcggacgttgccagcattctggactggatgttgaatcaggacttcacc
acggcctacaggaatattatggagttgaaaactctgaagggcttggcattacacgatatc
ctgacggagatacacttgtttgtgcacagagttgactttccatcttcagttcgaatacat
ttattgaccaaaatggcagacattgagtacagactgtctgtcggcaccaacgagaagatt
cagctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcgcagaggcc
tag
DBGET
integrated database retrieval system
