Vicugna pacos (alpaca): 102542679 Help Entry 102542679         CDS       T08098                                  Symbol SMARCC2 Name (RefSeq) SWI/SNF complex subunit SMARCC2   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism vpc  Vicugna pacos (alpaca) Pathway vpc03082   ATP-dependent chromatin remodeling vpc04714   Thermogenesis vpc05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:vpc00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     102542679 (SMARCC2)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     102542679 (SMARCC2)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     102542679 (SMARCC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vpc03021]     102542679 (SMARCC2)    03036 Chromosome and associated proteins [BR:vpc03036]     102542679 (SMARCC2) Transcription machinery [BR:vpc03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      102542679 (SMARCC2) Chromosome and associated proteins [BR:vpc03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     102542679 (SMARCC2)    PBAF complex     102542679 (SMARCC2)    GBAF(ncBAF) complex     102542679 (SMARCC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_2 Chromo CD99L2 Motif Other DBs NCBI-GeneID:  102542679 NCBI-ProteinID:  XP_031539246 UniProt:  A0A6J3B3F7 LinkDB All DBs Position 12 AA seq 1103 aa AA seqDB search MDRNVEMFMTIEKSLVQNNCLSRPNIFLCSEIEPKLLGKLKDIIKRHQGTVTEDKNSASH VVCPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRK VHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNY KKRKCSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVT LPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDN VTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLN PQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLAD TPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKS KEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSE HVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVD PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTS DEPERIEESGTDEARAEGQATEEKKEPKEPREGVGTVEEEAKEKTSEAPKKDDEKGKEGD SEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA LAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ QLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPLPPAGAAGPPSVHG LAMAPASVAPAPAGSGAPPGSLGSSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPWT PWPLTVPQPTNSSLNDARGSARQRAPRRGGPEPCHCGSCSGQPPAQCQPTARPRHPPASR PHGPEPRHGYPCATPTVRSQPDISLPHPTWRSRFQEQPSPHHWDPPPAWRVRHYVRKAPA PPKPPPCPSEACIFISDCSRTPV NT seq 3312 nt NT seq  +upstreamnt  +downstreamnt atggaccgcaatgtggaaatgttcatgaccattgagaagtccttggtgcagaataattgc ctgtctcgacctaacatttttctgtgctcagaaattgaacccaaactgttagggaaatta aaagacattatcaagagacatcagggaacagtcaccgaggataagaacagcgcctcccat gttgtgtgtcctgtcccggggaacctggaggaagaagaatgggtgcggccagtcatgaag agggataagcaggttcttctgcactggggctactatcctgacagttatgacacgtggatc ccagccagtgaaattgaagcatctgtggaagatgctccaactcctgagaaacctaggaag gttcatgcaaagtggatcctggacacagacaccttcaatgaatggatgaacgaggaagac tacgaagtaaatgatgacaaaaatcccgtctcccgccgaaagaagatttcagctaagaca ctgaccgatgaggtgaacagcccagattcagatcgacgggacaagaagggggggaactat aagaagaggaagtgctccccatctccttcaccgaccccagaagccaaaaagaagaatgct aagaaaggtccctcaacaccttacaccaagtcaaagcgtggccaccgggaagaggagcag gaagacttgacaaaagacatggatgagccctcaccggtccccaatgtggaagaggtgaca ctgcccaaaacagtcaacactaagaaggactcggagtcagccccagtcaaaggaggcacc atgactgacctggatgaacaggaggatgaaagcatggagaccacgggcaaggatgaagat gagaacagcacggggaacaagggggagcagaccaagaacccagacctgcacgaggacaac gtaactgagcagacccaccacatcatcatccccagctatgctgcctggtttgactataac agtgttcatgccatagagcggagggcgcttcctgagttcttcaatggcaagaacaagtcc aagactccagaaatctacctggcctatcgaaacttcatgattgacacttaccggctgaac ccgcaggagtatctcacgtccactgcctgccgcaggaacctggcgggcgatgtctgcgcc atcatgagagtccacgccttcctagaacagtggggtcttattaactaccaggtggatgct gagagtcgaccaaccccaatggggcccccgcccacctctcacttccacgtcctggcggac acaccatcagggctggtgcccctgcagcccaagaccccgcagggccgccaggttgatgct gataccaaggctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaag ggcaagccagagctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaagc aaagagaaaccaacagatatgcagaacttcgggctgcgcacagacatgtacacgaagaag aacgtgccctccaagagcaaagctgcggccagtgccactcgagagtggacagaacaggag accttgctactcctggaggcactggaaatgtacaaagatgactggaacaaagtatcagag cacgtgggaagccgcacgcaggacgagtgcatcttgcattttcttcggcttcccattgaa gacccatacctggaggactctgaggcctccctgggccccctggcctaccagcccatcccc ttcagccaatcgggcaacccagtgatgagcactgttgctttcctggcctctgttgtcgat cctcgagtggcttctgctgccgcgaagtcagccctagaagaattctccaaaatgaaggaa gaggttcccacagccttggtggaggcccatgttcggaaagtggaagaagcagccaaagtg acaggcaaggcggacccagccttcggtctagaaagcagtggcattgcaggaaccacttct gatgagcctgagcggatcgaggagagcgggactgacgaggcacgggcggagggccaggcc acggaggagaagaaggagcccaaggagccgcgagaaggagttgggactgtagaggaagaa gcaaaggagaagaccagcgaggcacccaagaaggatgatgagaaaggcaaggaaggcgac agcgagaaggagtcagagaagagcgatggggacccaatagttgatccggagaaggagaag gagcccaaggaagggcaggaggaagtgctgaaggaagtggtggagtcggagggggagagg aagacgaaggtggagcgtgacatcggcgagggcaacctgtccaccgccgccgctgctgcc ctggccgctgccgccgtgaaggccaagcacctggctgccgtggaggagaggaagatcaaa tctctggtggccctgctggtggaaacccagatgaaaaagttggagatcaaactccggcac tttgaggagctagagaccatcatggaccgggagcgagaagcgctggagtaccagaggcag cagctcctggccgacagacaagccttccacatggagcagctgaagtacgcggagatgcgg gcccggcagcagcacttccagcagatgcaccagcagcagcagcagccaccgccggccctg cccccgggctcccagcccctcccacctgcaggcgctgctgggccgcccagcgtccacggg ttggctatggctccggcctctgtggcccctgctcctgccggcagtggggcccctcctgga agcttgggctcctctgaacagattgggcaggcagggtcaactgcagggccacagcagcaa cagccagctggagccccccagcctggggcagtcccaccaggggtaccccccccctggacc ccatggcccctcaccgttccccaaccaacaaactcctccctcaatgatgccaggggcagt gccaggcagcgggcacccaggcgtggcggcccagagccctgccattgtggcagctgttca gggcaacctcctgcccagtgccagcccactgccagacccaggcacccccctgcctccaga ccccacggccccgagcccaggcacggttacccctgtgccacccccacagtgaggagccag ccagacatctctctccctcaccccacatggagatcaaggttccaggaacagccctctccc caccactgggaccctcccccagcctggagagttcgtcactacgtaaggaaagctcctgcc cctccaaagcccccaccatgcccgtcagaggcgtgcatttttatatcggattgttcaagg actcctgtttga

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