Vicugna pacos (alpaca): 102542911
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Entry
102542911 CDS
T08098
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102542911 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102542911 (HCN3)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102542911 (HCN3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
102542911
NCBI-ProteinID:
XP_006214707
UniProt:
A0A6I9IJK3
LinkDB
All DBs
Position
21
AA seq
871 aa
AA seq
DB search
MAVALPRLLLPCPAFARLSPGGAAQSARRPLASLSHTPPPPRAPAVPSRLRLRSQPAGLR
RLGLRGVGGPGWPQQGLGGQTCKLTGVMEADQRPTTGASDGATPGLEAAPSAAPAPTTAA
SGPIPGSRPGSEPKRRQLGTLLQPTVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSD
FRFYWDLIMLLLMVGNLIVLPVGITFFKEENSPPWIVFNVLSDTFFLMDLVLNFRTGIVV
EEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIVR
FTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFL
VPMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLS
MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHR
YQGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQP
GDLVVREGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLTRGRRTASVRADTY
CRLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLRRIGKKNSVLQRKRSEPSPGSSGGIME
QHLVQHDRDMARGVRGLAPGTGARLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHQRGPL
PLSPDSPVTLLARSARRSAGAASPASPLVPVRAGPLLARGPWASTSRLPAPAARTLHASL
SRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQPSLPQRAAGDGSPGRKGSGSEQVPPSG
LLAKPPGTAQPPRPSVPEPATPRGPQLSANM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcactgccccgcctcctcctgccctgcccagccttcgcgcggctctcgcca
gggggcgcagcgcaatccgcccgccgcccgctggcgagtctgtcgcacacaccccctccg
ccccgcgcgccggcagttcccagtcgactacgcctccgctcccagcccgccgggctgcgc
cggctcggactccggggtgtcgggggtcccggatggccgcagcagggtctaggaggccaa
acgtgtaagctgactggagtcatggaggcggaccagcggccaaccactggggccagcgac
ggggcgacccctgggctggaggcggcgccttcggctgccccggcgcctacgaccgcggcc
tcgggtccgatccccgggtccaggcccgggtccgagcccaagaggaggcagctcgggact
ctgctccagcccacggtcaacaagttctcccttcgcgtgttcggcagccacaaagcagtg
gaaatcgagcaggagcgggtcaagtcagcgggggcctggatcatccacccctacagcgac
ttccggttttactgggatctgatcatgctcctcctgatggtggggaatctcattgtgcta
cctgtgggcatcaccttcttcaaggaggagaactctccgccttggatcgtcttcaatgtc
ctctctgacaccttcttcttgatggatctggtgctcaacttccgcacgggcatcgtggta
gaggagggtgctgagatcctgctggcaccacgggccatccgcacacgctacctgcgcacc
tggttcctggttgacctcatctcctctattcctgtggattacatcttcctggtggtagag
ctggagccacgactggacgctgaggtctacaaaacagctcgggccctgcgcatcgtgcgt
ttcaccaagatcctcagcctgctgcggctgctccgcctctcccgcctcatccgctacata
caccagtgggaggagatctttcacatgacctatgacctggccagtgctgtggttcgcatc
ttcaacctcatcgggatgatgctgctgctatgtcactgggatggctgtctgcagttcctg
gtccccatgctgcaggacttccctcctgactgctgggtctccatcaaccacatggtgaac
cactcatggggccgccagtattcccacgccctgttcaaggccatgagccacatgctctgc
attggctacgggcagcaggcacctgtaggcatgcccgacgtctggctcaccatgctcagc
atgatcgtgggtgctacctgctacgccatgttcatcggccatgccaccgctctcatccag
tccctggactcttcccggcgtcaataccaggagaagtacaagcaggtggagcagtatatg
tccttccacaagctgccagctgacacacggcagcgcatccatgagtactatgagcaccgc
taccagggcaagatgttcgatgaagaaagcatcctaggcgagctgagtgaaccacttcgg
gaggagatcattaacttcacctgccggggcctcgtggcccacatgccgctgttcgcccat
gccgaccccagcttcgtcacagccgtgctcaccaagctgcgctttgaggtcttccagccg
ggggacctcgtggtgcgtgagggctccgtgggcaggaagatgtacttcatccagcatggg
ctgctcagtgtgctggcacgtggcgcccgggacactcgcctcactgatggatcctacttt
ggggagatctgtctgctgactcggggccgtcgcacagccagcgtgcgagctgacacctac
tgccgcctctactcactcagcgtggatcatttcaacgctgtactggaggagttccccatg
atgcgccgagccttcgagacagtggccatggatcggctgcgccgcatcggtaagaagaat
tccgtactgcagcggaagcgctctgagccaagtccgggcagcagtgggggcatcatggag
cagcacttggtgcagcacgacagggatatggctcggggtgttcggggcctcgccccaggt
acgggagctcggctcagcggaaagccagtgctgtgggagccactagtgcacgcacccctg
caagcagccgccgtgacctccaatgtggccattgccctgactcaccagcgaggccctcta
cccctctcccctgactctccagtcaccctacttgctcgctctgctcgaagatcagcagga
gcagcctccccagcctccccactggtgcctgtccgtgctggccctctgctggctcggggg
ccatgggcatccacctcccgcctgccggccccagctgcccgaaccctccacgccagccta
tcccgggccgggcgctcccaggtgtccctgctgggcccccccccaggaggaggtggacgg
agactaggacctcggggccgcccactctcagcctcccaaccctctctgcctcagcgggca
gcaggtgatggctctcctgggcgtaaaggctcaggaagtgaacaggtacccccctcaggg
ctcctggccaagcctccagggacagcccagccccccaggccatcagtgcctgagccagcc
accccccggggtccccagctctctgccaatatgtga
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