KEGG   Vicugna pacos (alpaca): 102542957
Entry
102542957         CDS       T08098                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102542957 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vpc03041]
    102542957 (RBM22)
Spliceosome [BR:vpc03041]
 Complex B
  Other components
   Prp19-related factors
    102542957 (RBM22)
 Complex C
    102542957 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12 RRM_PARP14_3
Other DBs
NCBI-GeneID: 102542957
NCBI-ProteinID: XP_006204502
UniProt: A0A6I9I5V1
LinkDB
Position
3
AA seq 420 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcgacctctctgggttccaacacgtacaacaggcagaactgggaggatgcggacttc
cctattctgtgccagacgtgtcttggagaaaacccatatatccgaatgaccaaagaaaag
tacgggaaggaatgcaaaatctgtgccagaccattcacagtgtttcgctggtgccctggg
gtccgcatgcgtttcaaaaagactgaagtgtgccaaacctgcagtaaattgaagaatgtc
tgtcagacctgcctcttagacctagagtatggccttcccatccaggttcgtgatgcagga
ttgtcttttaaggatgacatgccaaagtcagatgtcaacaaagagtactacacacagaat
atggagagagagatttctaactctgatggaacacggccagttggcatgttggggaaagcc
acatccaccagtgacatgctgctcaaactggctcggaccacaccctactataaaaggaat
cgaccccacatttgctctttctgggtgaaaggagaatgtaagagaggagaggagtgtcca
tacagacatgagaagccgacagatccagatgacccccttgctgatcagaacattaaagac
cgatattatggaatcaatgaccctgtggcagataaacttctaaagcgggcttcaacaatg
cctcgtctggacccgccagaggacaagactatcaccacattgtatgttggtggtctgggc
gataccattactgagacagatctaagaaatcatttctaccagtttggagagatccggacg
atcactgttgtgcagagacagcagtgtgctttcatccagtttgccacaaggcaggctgca
gaagtggctgccgagaagtcctttaataagttaattgtcaatggccgccggctcaacgtg
aaatggggaaggtcccaagcagccagaggaaaagaaaaagagaaggatggaaccacagac
tccggaatcaagctggagcccgttccagggctaccaggagctcttcctcctcctcctgct
gcagaagaagaagcctctgccaactacttcaacctacccccaagtggtcctccagccgtg
gtgaacattgccctgccacctccccctggtattgccccgcccccacccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactatccttctcaggaccctcagaggatgggagctcatgccgggaaacacagcagcccc
tag

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