Vicugna pacos (alpaca): 102542957
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Entry
102542957 CDS
T08098
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102542957 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102542957 (RBM22)
Spliceosome [BR:
vpc03041
]
Complex B
Other components
Prp19-related factors
102542957 (RBM22)
Complex C
102542957 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102542957
NCBI-ProteinID:
XP_006204502
UniProt:
A0A6I9I5V1
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All DBs
Position
3
AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacgtacaacaggcagaactgggaggatgcggacttc
cctattctgtgccagacgtgtcttggagaaaacccatatatccgaatgaccaaagaaaag
tacgggaaggaatgcaaaatctgtgccagaccattcacagtgtttcgctggtgccctggg
gtccgcatgcgtttcaaaaagactgaagtgtgccaaacctgcagtaaattgaagaatgtc
tgtcagacctgcctcttagacctagagtatggccttcccatccaggttcgtgatgcagga
ttgtcttttaaggatgacatgccaaagtcagatgtcaacaaagagtactacacacagaat
atggagagagagatttctaactctgatggaacacggccagttggcatgttggggaaagcc
acatccaccagtgacatgctgctcaaactggctcggaccacaccctactataaaaggaat
cgaccccacatttgctctttctgggtgaaaggagaatgtaagagaggagaggagtgtcca
tacagacatgagaagccgacagatccagatgacccccttgctgatcagaacattaaagac
cgatattatggaatcaatgaccctgtggcagataaacttctaaagcgggcttcaacaatg
cctcgtctggacccgccagaggacaagactatcaccacattgtatgttggtggtctgggc
gataccattactgagacagatctaagaaatcatttctaccagtttggagagatccggacg
atcactgttgtgcagagacagcagtgtgctttcatccagtttgccacaaggcaggctgca
gaagtggctgccgagaagtcctttaataagttaattgtcaatggccgccggctcaacgtg
aaatggggaaggtcccaagcagccagaggaaaagaaaaagagaaggatggaaccacagac
tccggaatcaagctggagcccgttccagggctaccaggagctcttcctcctcctcctgct
gcagaagaagaagcctctgccaactacttcaacctacccccaagtggtcctccagccgtg
gtgaacattgccctgccacctccccctggtattgccccgcccccacccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactatccttctcaggaccctcagaggatgggagctcatgccgggaaacacagcagcccc
tag
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integrated database retrieval system