Vicugna pacos (alpaca): 102542990
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Entry
102542990 CDS
T08098
Symbol
USP42
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpc01002
]
102542990 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102542990 (USP42)
Enzymes [BR:
vpc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102542990 (USP42)
Peptidases and inhibitors [BR:
vpc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102542990 (USP42)
Ubiquitin system [BR:
vpc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102542990 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102542990
NCBI-ProteinID:
XP_031532645
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSTHTLSLGPVPGA
VVYSNSSVPEKSKPSPQKDQVLGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSTHSPGQSSPRPVISQRVVSSKQAASGFIGPQLPAHVLKNPPHLNGTGPLKETPSSS
VSSPSGTSSVGKAGPVNASASVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSNSLESPSKPAPSSTITTSSAIQSTSSAATASASSKVTKQAPAGEPCPQPVMNGRPKL
SSSVLVPYGAESSEESDEEARGLGKENGLGPGEGSSPPAADAEAGEASQHVLYEPAALNG
ATSSDSDPGENGLLTDGASCQIQPALHSENPFSKANGLPGKLVPAPLPPLPEDKILETFK
LSSRGKGSAEETRPPGTERSPAEEPEAEPAAGSPAPCLRENLDTVTSLSSKLKKASPPPD
PSIQSAKEDVSANVSAEPEESLPGVGHSCNTSQSTMGDEPLPKLCDPGNLIGSQSEPSLD
VQGTLPECPQDLTAAATAGSVSPSHSASARAVGDSERERSVPSGRDKCSDVEDASRSTGA
SAEEAPSSHLDKTTENHSEGGPEPSPGERGEENQVGQKVQDPPPVQEKISSLRKVDRGHY
RHRRDGSSSGERAREGGSRTQGPHRRRPPCYARERPXXXXXXXXSPAEHRSLGRYGHHHS
RSRGGSDQDWSRYHHSEAEHSWAREKYHPDRARWGKCRYFHDRYAPYPAREVRDWKPFHA
DREYDRAGPYGGRPYKDYYRGRKAYEPAAKEKARHHFASPRAGPPHPLPPYPDKFSHEKI
ALVAEDHSCHLASRFHEHGTVKSRKRRYDSIEDGGSCLGKKAWGGLQQGPLEEPKGKKHK
KSKKKKKSKDKHRDRDARHQPDSDLSGPHSDADLHRHRKKKKKKKRHSRKSEDLVRGTEP
RGPRAASCETVGRGRGAAGPPLADGRPLEGPGPFREKSRPPRVEGREARRQLSECGQGKR
KHSEFGIQARVSLEKVVGARTGPPWA
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagttctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaactcacacactttccttaggaccagtacctggtgct
gtagtttattcaaattcatctgtacctgaaaagtcaaaaccgtcgccacaaaaggatcaa
gtcctaggtgatggcattgctcctccacaaaaagttcttttcccttctgagaaaatttgt
cttaagtggcaacaaactcatagagtaggagccggactccagaatttgggcaatacctgt
tttgccaacgcagcgctgcagtgtttaacgtacacgccacctctcgccaattacatgcta
tcacacgaacactccaagacgtgtcatgcagaaggattttgtatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttatcaaaccgatgtttgtcatt
aatgagatgcgacgtatagctaggcacttccgctttggaaaccaggaagatgcccatgag
ttcctccagtacactgttgacgctatgcagaaggcgtgcctgaatggcagcaataaatta
gacagacacacccaggctaccacactcgtttgtcagatatttggaggatacctaagatct
cgagtcaaatgtttaaattgcaaaggtgtttcagatacttttgatccatatctcgatata
acattggagataaaggctgctcagagcgttaataaggcgttggagcagtttgtgaagccg
gagcagctggacggagaaaactcctacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatacatagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgccaaggatgtgaaatatcctgagtatcttgatatt
cgaccgtacatgtctcaaccaaacggagaaccgattatttatgttttatatgcagtcctg
gtacacactggttttaattgccacgctggccactatttctgctacataaaagctagcaac
ggcctctggtaccaaatgaatgactccatcgtatccactagtgacattagatcggtactc
agccaacaagcttatgttctcttttatatcaggtcccacgatgtgaaaaatggaggtgaa
cttactcattccacccacagccccggccagtcctctccccgaccggtgatcagtcagcgg
gtcgtcagcagcaagcaggcggcgtcaggcttcatcggaccccagcttcctgctcacgtg
ctcaagaacccacctcacctgaacgggacgggaccgttgaaagagacgccaagcagctcc
gtgtctagtcctagtgggacttccagtgtcggcaaggctggtcctgttaatgcttcagct
tctgttcagaactggtcagtgaacaggtcctctgttattccagaacatcccaagaaacag
aaaatcacgatcagtattcacaacaaattacctgttcgccaaggtcagtcccagcctaac
cttcacagcaattctttggagagccctagcaagcccgccccctcttctaccattaccact
tcttctgcaatacagtctacctcgagcgcagccacggcgtcagcgtctagtaaggtaaca
aagcaggcccccgcaggcgagccctgtccccagcccgtgatgaacggcaggcccaagctg
agctccagcgtgctggtcccctacggcgccgagtcctccgaggagtcggacgaggaggcg
aggggcctcgggaaggagaacgggctggggccgggcgagggctcgagccctcccgctgca
gatgccgaagccggcgaggcctcccagcacgtgctctacgagcccgcggctctaaatggt
gctaccagttcagacagcgacccgggcgagaacggcctgctgacagatggtgccagttgc
caaatccagcctgctttacactcagaaaaccccttttccaaggccaacggtctccccggg
aagttggtgcctgctcctttgccacctctcccggaagacaaaatcttagagaccttcaaa
ctcagcagcagagggaaaggctccgcagaggagacaaggccgcccgggacagagcggagt
cctgcagaggagcctgaggcagagccagcggccggcagccccgctccctgtttgcgtgag
aacctggacacagtcacgagtctcagcagcaaattaaagaaggcctcgccgcccccggac
cccagcatccaatctgccaaagaagacgtctctgcgaacgtttccgcagaacctgaggag
tctctgccgggtgttggccattcttgtaacaccagccagagtaccatgggggacgagccg
cttcctaagctgtgtgaccctgggaatctaataggcagtcagagcgaaccgtccctggac
gtccaagggacgttaccggagtgtccccaggacttgacagcagcggccacagcagggagc
gtgagccccagtcactcagcctcggcccgggccgtgggcgacagtgagcgggagcgctca
gtccccagcgggcgagacaagtgctcggacgtggaggacgcttccagaagcaccggggct
tccgcagaggaggcgccctcttctcacttggacaagaccacagaaaaccactcggaaggg
ggccctgaaccaagtcctggtgagagaggtgaagaaaatcaggtcggacagaaagtccag
gatcctcctccagttcaggaaaaaatcagcagcctcagaaaagtcgatcgaggacattat
cgccaccgaagagatggctcctcgagcggggagcgcgcgcgagagggcgggagccggact
cagggcccgcatcgcaggaggccgccctgctacgcgcgggagcggcccnnannnnnnnnn
nnnnnnnnnnncagccccgccgagcaccgctccctgggccggtatggtcaccaccactcc
cggagcaggggcggctcggaccaggactggagccggtaccaccactcggaggccgagcac
tcctgggctcgggagaagtaccacccggacagggcgcggtggggcaagtgcaggtacttc
cacgataggtacgctccctaccccgctcgggaggtgcgggactggaagcccttccacgcc
gaccgggagtacgacagagctgggccctacggtggccggccctacaaggactactacaga
ggcaggaaggcctacgagccggccgccaaggagaaggcccggcaccacttcgccagcccc
cgagcaggcccgccccaccccctccctccctaccccgacaagttctcccacgagaaaatt
gcacttgtagctgaagaccatagttgtcacctcgccagtcggtttcatgaacacggaact
gtaaagtcacggaaacggagatacgatagcatagaggatggtggcagctgcctgggaaag
aaggcctgggggggtctccagcagggccccctagaagagcctaaagggaagaagcacaag
aagtcaaagaagaaaaaaaaatccaaagacaaacaccgagaccgagacgccaggcatcag
ccggattcggacctctcggggccgcactcggacgccgacctccacagacacagaaagaag
aagaagaaaaagaagagacactcgaggaagtcagaggacttagtcaggggcacggagccg
cgcgggcccagggccgccagctgtgagactgtgggccgtggccggggcgccgctgggcct
cccctggcggatgggcggcccctggagggcccgggacctttccgtgagaagagcagaccc
ccgcgggtagagggcagggaggcccggcgtcagctgtccgagtgcggccagggtaagagg
aaacactcggagttcggaatacaggcgcgcgtgtccttggagaaggtggttggtgccagg
acagggccaccctgggcctga
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integrated database retrieval system
