Vicugna pacos (alpaca): 102543030
Help
Entry
102543030 CDS
T08098
Symbol
SF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
KO
K13095
splicing factor 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102543030 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102543030 (SF1)
Spliceosome [BR:
vpc03041
]
Complex A
Other components
Complex A specific factors
102543030 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
102543030
NCBI-ProteinID:
XP_006216734
UniProt:
A0ABM5DZK9
LinkDB
All DBs
Position
25
AA seq
613 aa
AA seq
DB search
MEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPI
YNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDE
YPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHAL
VTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQ
SSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVP
ASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGG
PGGPGGGPHSFPHPLPSLAGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPP
MDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQ
PPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTM
VPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPF
GMPPAPPPPPPQN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagaccgtgattccaggaatgcctacagttattccccctggacttactcgg
gaacaagaaagagcttatatagtgcaactgcagatagaagacctgactcgtaaactgcgc
acaggagacctgggcatcccccctaaccctgaggacaggtccccttcccctgagcccatc
tacaatagtgaggggaagcggctcaacactcgcgagttccgcacccgcaagaagctggaa
gaggagcggcataacctcatcactgaaatggttgctctgaaccctgatttcaagccacct
gcagattacaaacctccagcaacacgtgtgagtgataaagttatgattccacaagatgag
tatccagaaatcaactttgtggggctgctgattgggcccagagggaacaccttgaagaac
atagagaaggagtgtaacgccaagattatgatccgggggaaagggtctgtgaaagaaggg
aaggtcgggcgcaaagatggccagatgctgccaggggaagatgagccacttcatgccctg
gttactgccaatactatggagaatgtgaagaaagccgtggaacagataaggaacatcctg
aagcagggtattgagacccctgaggaccagaatgatctacggaagatgcagcttcgagag
ttggctcgcttgaatggaacccttcgggaagacgataacaggatcttaagaccctggcag
agctcggaaacccgcagcattaccaatactacagtgtgtaccaagtgtggaggggctggg
cacattgcttctgattgcaaattccagaggcctggtgaccctcagtcagctcaggataaa
gcacggatggataaggaatacttgtccctcatggctgaactgggggaggcacccgtgccc
gcatctgtaggctccacctctggacctgccaccacacctctggccagtgcacctcggcct
gctgctcctgccaacaacccacctccgccgtctctcatgtccaccacgcagagccgccca
ccctggatgaattctggtccttcagagagtcggccctaccacggcatgcatggaggtggg
cccggtgggcccggtggtggcccccacagtttcccgcacccactacccagcctggcaggt
gggcatggtggacatcccatgcagcacaaccctaatggacccccacccccgtggatgcag
ccgccgccgccaccgatgaaccagggcccccacccacctgggcaccatggccctcctcca
atggatcagtacctgggaagtacgcctgtgggctctggggtctatcgcctgcatcaagga
aaaggtatgatgccgccgccacctatgggcatgatgccgccaccgccgccgcctcccagt
gggcagcccccgcctcctccctctggtcctcttcccccatggcaacagcagcagcagcag
cctccgcctccccctccgcccagcagcagtatggcttccagtacccccttgccatggcag
caaaatacgacgactaccaccacgagcgctggcacagggtccatcccgccatggcaacag
cagcaggcggctgccgcagcttctccaggagcccctcagatgcaaggcaaccccactatg
gtgcccctgcccccaggggtccagccgcctctgccgcccggggcccctccccctccgccg
cctccgccgcctggttccgccggcatgatgtatgccccgcccccccctcctccgcctccc
atggacccttctaactttgtcaccatgatgggcatgggggtggcgggcatgccacccttc
gggatgcctccagctcccccaccgcctccaccacagaactag
DBGET
integrated database retrieval system
