Vicugna pacos (alpaca): 102543190
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Entry
102543190 CDS
T08098
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102543190 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102543190 (TRIM71)
04121 Ubiquitin system [BR:
vpc04121
]
102543190 (TRIM71)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102543190 (TRIM71)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102543190 (TRIM71)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102543190 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
DUF5711
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
102543190
NCBI-ProteinID:
XP_006200817
LinkDB
All DBs
Position
17
AA seq
634 aa
AA seq
DB search
MWLWSGAEITAFGSQKCPESHVRQVLCALDEVSRAPVLDQARRSAPPLLPVLHLYCDTCS
VPICRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVE
MKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLSKLEST
ISAVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKS
FGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGN
LFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVLVKSGRSYVGIGLPGL
SFGSEGDGDGRLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGSLGSRPGQFD
RPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVSSEGKI
LVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVI
HPDCQSARFLGSEGTGSGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGSQ
GSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtggctttggagtggcgcagaaatcacagcattcggctcccagaagtgccctgagtct
cacgtccgccaggtgctgtgtgctctggatgaggtctccagggcccctgtgctggaccaa
gctcgtcggagtgccccgccgttgctccccgtgctgcacctttactgtgacacgtgctcg
gtgcccatctgccgggagtgcacggtgggccggcacggcggccacagctttgtctacctc
caggaggcgctgcaggactcacgggcactcaccatccagctgctggctgacgcccagcag
ggccgccaggccatccagctgagcattgagcaggcccagacggtggccgagcaggtggag
atgaaggcaaaggtggtacagtcggaggtcaaggctgtgactgcaagacacaagaaggcc
ctggaggagcgggagtgtgagctgctgtggaaggtagagaagatccgccaggtgaaagcc
aagtctctgtacctgcaggtggagaagctgcggcaaaacctcagcaagctggagagcacc
atcagcgccgtccagcaggtgctggaggagggccgggcactggacatcctgctggcgcgc
gaccgcatgctggcccaggtgcaggagctcaagaccgtacgcagcctcctgcagccccag
gaggacgaccgggtcatgttcacgccccccgaccaggcgctgtaccttgccatcaagtcc
ttcggcttcgtcagcagcggggctttcgcgccactcaccaaggccacgggtgacggcctc
aagcgcgccctccagggaaaggtggcctccttcactgtcatcggctatgaccatgacggg
gagcctcgcctctcgggcggcgacctcatgtcagccgtggtcctgggccctgacggcaac
ctgtttggcgccgaggtgagcgaccagcagaacgggacatacgtggtgagctaccggccc
cagctggagggtgagcacctggtgtcggtcaccctgtgcaaccagcacatcgagaacagc
ccattcaaggtgctggtcaagtctggccgcagctacgtgggcatcgggctcccaggcctg
agcttcggcagcgagggcgacggggacggccggctatgccggccgtggggcgtgagcgtg
gacaaggagggctacatcgtggtggccgaccgcagcaacaaccgcatccaggtgttcaag
ccctgcggcgccttccaccacaagttcggctcgctgggctcccggcccgggcagttcgac
cggccggccggggtggcctgtgacgcctcccgcaggatcgtggtggcagacaaggacaat
catcgcatccaggtcttcaccttcgagggccagttcctcctcaagtttggcgagaagggg
accaagaacgggcagttcaactacccctgggacgtggcggtcagttccgagggcaagatc
ctcgtctctgacacccggaaccaccgcatccagctcttcgggcccgacggggtcttcctg
aataagtacggcttcgagggggctctctggaagcactttgactccccgcggggcgtggcc
ttcaaccacgagggccacctggtggtcaccgacttcaacaaccaccggctcctggtcatc
caccccgactgccagtcggcccgcttcctgggctcagagggcaccggcagtgggcagttc
ctgcgcccgcagggcgtggccgtggaccaggaggggcgcatcatcgtggccgactccagg
aaccaccgggtacagatgttcgagtccaacggcagcttcctgtgcaagttcggcagccag
ggcagcggcttcgggcagatggaccgcccctctggcatcgccgtcacgccggacgggatg
atcgtggtggtggacttcggcaacaatcggatcctggtcttctga
DBGET
integrated database retrieval system
