Vicugna pacos (alpaca): 102543368
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Entry
102543368 CDS
T08098
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102543368 (NPAS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102543368 (NPAS2)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102543368 (NPAS2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
bHLH_IRO3
PAS_9
bHLH_NPAS4
DehI
Motif
Other DBs
NCBI-GeneID:
102543368
NCBI-ProteinID:
XP_006203949
UniProt:
A0A6I9I8C9
LinkDB
All DBs
Position
28
AA seq
881 aa
AA seq
DB search
MPAWCFVGRCAPSPSRGGRLTFDLSVEPRRVGNQRLGTGTEGPDENPTPLLCLPLLKCSR
KNCRENLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVI
GFLQKHNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVATGGSILYVSDSI
TPLLGHLPSDVMDQNLLNFLPEQEHSEVYKMLSSHMLLTDSPSPEYLKSDNDLEFYCHLL
RGSLNPKEFPTYEYIKFVGNFRAYNNVPSPSCNGFDSTLSRPCRVSLGKEVCFIATVRLA
TPQFLKEMCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDL
ELLARCHQHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSY
AEVRVERRQELALEDPPLEAVHPSALKDKGSSLEPQQNFSALDMGTSGLNTSHSPSASSR
SSHKSSHTAMSEPASNPSKLRAEASTTALPRSAQELPVPGLSQAATMPAPLPAPSSCDLA
QQLLPQTILQSPPAPMTQFSAQLSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCL
VQDSNVQMFLQQPAVSLSFSGAQRPEAQRQLQQRPGPGPQPQLAASPQLPGQIASAQVTS
QHLLRESSVISTQGPKPMRSSQMVQGSGPAGTSLTPPFSSATAALPPALSLTTPASASQD
ASQCHPSPDFSHDRQLRLLLSQPIQPMMPGSCDARQPSEAGRTGRPVKYAQSQAVFQNPD
VHTTSSSASTPVLLMRQAVLHPTFPTSQPSPLKPAQAQQQPPHFLQVQAPTSLHSEQQDS
LLLSTYSQQPGTLGYQPPPPARPPRRVGSLSESSGLQQPPR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgtggtgttttgttgggaggtgtgccccctccccgagccgaggcgggaggctt
acctttgacctttctgtagagccgcgcagggtcggtaaccagaggctagggacagggacc
gaggggccagatgaaaacccaaccccgctcctctgcctgccactccttaagtgctcaagg
aaaaactgcagagaaaatctaatggatgaagatgagaaagacagggccaagagagcatct
cgaaacaagtctgagaagaagcgtcgggaccagttcaatgttctcatcaaagagctcagc
tccatgctccctggcaacacacggaaaatggacaaaaccaccgtgctggaaaaggtcatc
ggatttctgcagaaacacaatgaagtctcagcacaaacggaaatctgtgacattcagcag
gactggaagccttccttcctcagtaatgaggaattcacccagctgatgttggaggcactg
gacggcttcatcatcgcggtggcgacgggcggcagcatcctctatgtttctgacagcatc
acgcccctcctggggcatttgccgtcggatgtcatggatcagaatttgttaaatttcctt
ccagagcaagaacattcagaagtttataaaatgctttcttcccatatgctcctgacggat
tccccctccccagaatacttaaaatctgacaacgatttagaattttattgccatcttctc
agaggcagcttgaaccccaaggaatttccaacttatgaatacataaaatttgtaggaaat
tttcgcgcttacaacaatgtgcccagcccctcctgtaacggctttgacagcaccctttcc
aggccttgccgagtgtcgctgggaaaagaggtctgcttcatcgctaccgttcgtctggct
acaccacagttcttaaaggaaatgtgcatagttgacgaacctttagaggaattcacttca
aggcacagcttggaatggaaatttttatttctggatcacagagcccctccaatcatagga
tacctgccttttgaagttctgggaacctcgggctatgactactaccacgtcgatgacctg
gagctcctggccaggtgccaccagcacttgatgcagtttggcaaagggaagtcatgttgc
taccggtttctgaccaaaggccagcagtggatttggctgcagacccattactacatcacc
taccaccagtggaactccaagcccgagttcatcgtgtgcacacactcggtggtcagttac
gcggaggtccgggtggagaggagacaggagctggccctggaggacccgccgctggaggcc
gtccacccttcagccctcaaggacaagggctccagcctggaacctcagcagaacttcagt
gcccttgacatgggcacctcgggccttaacaccagtcactcaccatccgcgtcctcaaga
agttcccacaaatcctcccacacggccatgtccgagcctgcctccaatccgagcaagctg
cgggcagaggccagcaccacggctttgccaagatcagcccaggagctccccgtgccggga
ctcagccaggcagccacgatgccggctcccctgccggcgccttcgtcctgtgacctggca
cagcagctcctgcctcagaccattttgcagagcccacctgcccccatgacacagttttca
gcacagctcagcatgttccagaccatcaaagaccagctggagcagcggacgcggatcctg
caagccaacatccggtggcagcaggaagaactccacaagatccaggagcagctctgcctg
gtccaggactccaacgtccagatgtttctgcagcagccagctgtgtccctgagcttcagc
ggcgcccagcggcctgaggctcagcggcagctccagcagaggccgggcccaggcccccag
ccccagcttgcggccagccctcagcttccagggcagatagcctctgcccaggtcacaagc
cagcacttgctcagagaatccagtgtgatatcaacccagggtccgaagccaatgaggagc
tcgcagatggtgcagggaagcggccccgcggggaccagcctgacgccgcccttcagcagc
gccaccgccgcactcccgccagctctgagcctgaccacgcctgcttccgcctcccaggac
gccagccagtgccatcccagcccggacttcagccacgaccggcagctcaggctactgctg
agtcagcccatccagcccatgatgccgggatcctgtgacgcgaggcagccctcagaggcc
ggcaggactggacggccagtcaaatatgcacagagccaggctgtgtttcaaaaccccgac
gtgcacaccaccagcagcagcgcctcgacccccgtcctgctgatgaggcaggccgtgctt
caccccaccttccccacgtcccagccgtcgcccctgaagcccgcccaggcccagcagcag
ccgccgcacttcctgcaggtgcaggcgccaacctctctgcacagcgaacagcaggactcg
ctcctcctctccacctactcgcaacagccggggaccctgggctaccagccgcccccgccc
gcgcgccctccccgaagggtcggcagcctgtctgagtcctcaggcctccagcagccaccc
cggtag
DBGET
integrated database retrieval system
