Vicugna pacos (alpaca): 102543389
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Entry
102543389 CDS
T08098
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102543389 (TAF1C)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102543389 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
102543389
NCBI-ProteinID:
XP_015097448
UniProt:
A0A6J0AMP5
LinkDB
All DBs
Position
9
AA seq
890 aa
AA seq
DB search
MDFPSSLPPSLFMTGPLGLSDVPDVSFMCSWRDALTLPESPPQASENGAPHLAKGLLWEP
DTPGPLPLLPPGPDPWDPGLTARDLLFRGGYHFRRQPRAVLDVTEQLSQFLWDHGDIAFA
PLGKLMLENFKLEGAQSRSKKKTVVSVKRLLQDLGGHQPWGCPWAYLSYRQRRFSILGGP
VLATSLASLLGELLQEELAARWEQLLLDDAFTGGALAWVPGRTPGAGQLVYPAGGALDRL
YFQKVSLTPGSEPRVLGDPGHIQLRGPVRQVVTRTVQGEGKAHRHLRPLLTDLLPDHDPD
LLCPSALLAVRSDYHCALWKVGKPGHLAPLQVLQVEKGATGISLSPHLPGELTVCSRSGA
VCLWNPQDGLRQVHKDPETLVFRDPSPWRWADFTAHPRVLTVGDRTGVKLVDTQGPPGCG
LLLFRGGAEASCQKGERVLLTQYLGECSPESLQPTFHLVCTQFSLYLVDERLPLVPLLKW
NHGLSSTPVVAQLLPPPRPGCPRPLLLAGQAGELQLLHIAGEGASTPRLAGPPQSLPSRS
NSLSAFPLLEPKSQWRLQERLSAPTIGLAATVLPSASTPVLSLFQLSAAGDVFHQRLHLQ
ADPRPDSPAPTASWTPRATSRCSRWLKTLLEVPLAPPMWAAPTFSHRRLLGSFESREVEG
KVPEGLRTAMAEGRLLQHRDLGLLPTREQPPAPEPGPEDELSERLEAAWEGRVAAWWERR
QGGSSGPGKQPKRHKRRTQLSSTFSSLSGRLDLSDATSPPPSPDRTVPEARPQPPVTPPS
QELTQEPWAEGIPSERQQTLRDYMAELPLQGDTPGEASAPSSQTSSIRGTSSRQQTLRDC
TVKLQLRGDTAGGASMPSSQTSSVRATLSRQQAAILSGSQPLRKKPRMGF
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctcccgccctcgttgtttatgactggtccccttggtctgagc
gatgtccctgatgtgtccttcatgtgcagctggagagatgcgctaaccctaccagagtcc
ccaccccaagcctctgagaacggggctccacatttggcgaagggcctgctctgggagcca
gacacccctgggccccttcctttgctgcctcctggtcccgatccctgggaccctggcttg
actgcccgggatctgcttttccggggaggctaccacttccgaagacagccccgcgctgtg
ctggacgttactgagcagctcagccagttcctgtgggaccatggggatatcgcctttgca
cccctggggaagctgatgctagagaatttcaaactggaaggagctcagagtcgctctaag
aagaagacagtggtcagtgtgaagaggctactccaggacctcggtggacaccagccctgg
ggttgtccctgggcttacctcagctaccgacagcgccgtttctccatccttgggggcccc
gtcctggctacatcgctggcgagcctcctgggagagctgctacaggaggagctggcagca
cggtgggagcagctgctcctggacgacgccttcactgggggtgcactggcctgggtgcct
ggcaggacgcccggggccgggcagctggtctaccctgcaggaggcgccctggacaggctg
tatttccaaaaggtcagtctgaccccaggcagtgagccccgggttctcggggaccctggc
cacatccagctccgcggacctgtccggcaggtggtgacccgcactgtgcagggagaaggt
aaggcccatagacacctccgtcccctgctgactgacttgctgcctgaccatgaccctgac
cttctctgtccctcagctctgctggcagtccgctctgactaccactgtgcactgtggaag
gtcggtaagccagggcatctggcccctctccaggtgctgcaggttgagaagggggccacc
gggatcagcctcagccctcacctgccaggagagctgaccgtctgcagccgttctggagct
gtctgtctgtggaacccccaggacgggctgcggcaagtccacaaggaccccgagaccctt
gtattccgagacccctctccctggcgttgggcagacttcaccgcccaccctcgagtgctg
actgtgggtgatcgcactggagtgaaactcgtcgacactcagggtccgccgggctgtggt
ctgctgctttttcggggtggggcggaagcatcgtgccagaaaggggaacgtgtcctactg
acccagtacctgggggagtgcagccccgagtctctgcagcccacattccaccttgtctgt
acccagttctcgctctacctggtggacgagcgtctccccttggtgcctctgctgaagtgg
aaccatggcctctcttccactcctgtggtggcccagctgctgcccccgccccgccctggc
tgcccacggccactgctcctggcaggccaggccggagagctgcagttgctgcacatcgca
ggagagggggcctccacgccccggctggcagggcccccgcagtctctcccctccaggagc
aactctctctctgccttccccctgctggagcccaagagtcagtggcggctgcaggagcgg
ctgagcgcgccaactataggtctggccgccactgtcctgccctctgcctccacaccagtc
ctgtcactcttccaactctcggcagctggagatgtcttccaccagcgcctccacctccag
gcagaccccaggcccgactctcctgcccccacggcttcctggaccccccgggccacttcc
cgctgcagccggtggctgaagaccctgctagaggtgcctctggctcccccgatgtgggct
gcacccaccttctcccaccgccgtctgctgggcagctttgagtcacgggaggttgagggg
aaagtgccagagggtctccgcacagccatggccgaagggcggctcctgcagcacagggac
ctgggcttgctcccaaccagagagcagccccctgcccccgagccgggccctgaggatgag
ctcagtgagcgtttggaggcagcctgggaaggccgggtggcggcctggtgggagaggcgt
cagggtggcagctcagggcctggaaaacagcccaagcggcacaagcgccggactcagctg
tccagcaccttctcctcgctcagcggccgcttggacctctcggatgccaccagccctcct
cccagcccagaccggacagttcctgaggccaggcctcagcccccagtgaccccgccctcc
caggagttgacccaggagccgtgggcagaggggatcccctcggagcggcagcaaactctc
cgggactacatggctgaactgcctctccaaggggacaccccaggagaggcctctgcaccc
tcctcccagacttccagcatccgaggcacctcctctaggcagcagaccctccgggactgc
actgtcaagctgcagctccgaggagacactgcagggggtgcttccatgccctcctcccag
acctccagcgtccgggccaccctctccaggcagcaagcagccatcctctccggctctcag
ccgctccggaagaagccccgcatgggcttctga
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