Vicugna pacos (alpaca): 102543452
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Entry
102543452 CDS
T08098
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102543452 (DHX35)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102543452 (DHX35)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
Complex C specific factors
102543452 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
ABC_tran
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
102543452
NCBI-ProteinID:
XP_006202603
UniProt:
A0A6J0AFI5
LinkDB
All DBs
Position
19
AA seq
703 aa
AA seq
DB search
MAAPVGPVKFWRPGTEGPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLR
NHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRV
AEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSDPTRDTCVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA
LGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC
GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFEKLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCHLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQASRVHRKFAV
EEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE
GDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKVQDQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtgggaccggtcaagttctggagacccggtacagagggaccaggcgtc
agcatctctgaagagagacagagtctagctgaaaactctgcaaccactgttgtttacaat
ccttacgctgcgctctctatagagcagcagaggcagaagctgccagtgttcaagcttagg
aatcatatactatacttaatagaaaactatcaaacagtggtgattgttggagaaacagga
tgtgggaaaagcactcagattccacaataccttgcagaagctggctggacagccgaagga
agagtggtgggagtgacccagcctcgaagagtggctgctgtgaccgttgcagggagagta
gctgaggaaaggggtgcggtgttgggccatgaggtgggctactgcatccgctttgacgac
tgcaccaacccgctggctacgagaattaagtttctgactgatggaatgctggtcagggag
atgatggttgatccattgttaacaaaatatagtgccatcatgctggacgaagcccacgag
aggaccttgtacaccgacattgccattggtttgctgaaaaagattcagaagaagcgaggg
gatcttcgattgattgtggcttcagccacgttggatgcagagaaatttcgggatttcttt
aatcagaatgacaccagtgacccaaccagggatacgtgtgtgatccttacggtggaaggg
cgaacatttccagtggacatcttttatctgcaaagtcctgttccagattatatcaaatca
actgtagaaactgtgatgaaaattcaccagacagagggagatggagacatactagcattt
cttactggccaggaagaggtggaaaccgtcgtgtctatgctgatcgagcaggctcgagca
ctgggtcggactgggatgaagagacacctccgggttctccccatgtatgcaggtctgcct
tcctttgagcagatgaaggtgtttgaaagggtgtcacgcagtgtcagaaaggtgatagtg
gccaccaacgtggcagaaacctccatcacaatcagcgggattgtgtatgtgattgactgt
ggtttcgtgaaactccgagcctacaaccctaggacagctattgagtgcttggtggtggtc
ccagtgtcccaggcatcagccaaccagcgagcaggacgtggtggccgcagccgctcagga
aaatgttaccgcctttatacagaggaagcctttgagaagctgcctcagtccaccgttccg
gagatgcagcggagcaacctggcacccgtcatcctgcagctgaaagcgctgggaatcgac
aacgtcctcaggttccacttcatgtctccccctccggcacagtcgatggttcaggcgttg
gagttactctatgctttgggaggtctggacaaagactgtcacctaactgaaccgcttggc
atgagaatagcagagtttcctttgaatcccatgtttgcaaaaatgctgcttgaatcagga
aattttggctgttctcaggaaattctaagcattgcagccatgatgcagatccagaatgtc
tttgtggtcccctcaaaccagaagtctcaggctagtcgagtgcaccgaaaatttgctgta
gaggagggcgatcatctgaccatgctcaacgtgtatgaagccttcatcaaacacaataag
agctctcagtggtgtcaggagcatttcctgaattacaagggtctcgtcagagctgcgaca
gtgagagagcaactgaaaaagctactcgtcaagtttcaagtgcccaagaaatctagtgaa
ggtgatccagatccggtcctgaggtgcattgtttccggattctttgccaatgcagcaagg
tttcactctactggagcttataggaccatccgtgacgatcatgagttgcacatccaccct
gcgtcggtcctctatgcagagaagccgcctcgctgggtcatctacaatgaagttatacag
acctccaagtattacatgagggacgtgactgctattgaatcggcttggctgttggagctg
gctccgcacttttatcaacaagggacacacctgtccctcaaagccaagagggccaaggtc
caggaccagtga
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