Vicugna pacos (alpaca): 102543670
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Entry
102543670 CDS
T08098
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03030
DNA replication
vpc03420
Nucleotide excision repair
vpc03430
Mismatch repair
vpc03440
Homologous recombination
vpc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102543670 (RPA1)
03420 Nucleotide excision repair
102543670 (RPA1)
03430 Mismatch repair
102543670 (RPA1)
03440 Homologous recombination
102543670 (RPA1)
03460 Fanconi anemia pathway
102543670 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102543670 (RPA1)
03032 DNA replication proteins [BR:
vpc03032
]
102543670 (RPA1)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102543670 (RPA1)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102543670 (RPA1)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102543670 (RPA1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102543670 (RPA1)
MMR (mismatch excision repair)
102543670 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102543670 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
102543670
NCBI-ProteinID:
XP_006214509
UniProt:
A0A6I9IJB1
LinkDB
All DBs
Position
16
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GHGQQPVVPSPVSAASASTSRPQQQNGSPGVGSTVPKAYGASKIFGKAGGTSIVNSSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTSVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGISDLESKSKDSLVDIIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGMGGSNTNWRTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLIANIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcctctttcatgttggcaaca
cagttgaaccatcttgttgaagaagaacaattgtctagcaactgtatttgccagattaac
cgatttattgtaaacactctgaaagatggaaggagagtggttattttgatggagttagaa
gttttgaaatcagctgaagcagttggagtaaagattggcaatccagtgccctataacgaa
ggacacggacagcagccagtagtcccttctccagtctcagcggccagtgcatcaaccagc
aggccccagcaacagaatgggagcccaggagtgggttccactgtacctaaggcttatggt
gcctcaaagatatttggaaaagctggaggtaccagcatagtgaacagctccggggggaca
cagtccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatctgt
gctcgtgttaccaacaaaagtcagatccgtacgtggagcaattcccggggggaagggaag
cttttctctatagaactcgttgatgaaagtggtgaaatcagagcgacagctttcaatgag
caagcggacaagttcttccccctgattgacgtgaacaaggtctattacttctctaaaggc
accctgaagattgccaacaaacagttcacatctgtcaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagacggtcatcacttacctacagttcagttt
gatttcacagggatcagtgacctagaaagcaagtctaaagattcacttgtagacataatt
ggaatctgcaagagctatgaagatgtcactaaaatcacagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtctgggaaagtggtgaacgctactttg
tggggagaagatgctgatagatttgatggttctcgacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcatcaagtacagtcatt
atgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagagggacaa
gccctagatggcatttccatctctgatctaaagagtggaggaatgggaggaagcaacacc
aactggagaactttatatgaggttaaatccgagaacctgggccaaggcgacaagcccgac
tattttagctctgtggccacagtggtatatcttcgcaaggagaactgtatgtaccaggcc
tgccccactcaggactgcaataagaaagtgattgatcagcagaatggcttgtaccgctgc
gagaagtgtgaccgtgaattccccaatttcaagtaccgcatgatcctgtcggtaaatatt
gccgattttcaggagaatcagtgggtcacatgtttccaggagtctgcggaggccatcctt
ggacaaagcactgcttatcttggagagttaaaagagaagaacgagcaagcgtttgaggaa
gttttccagaatgccaactttcggtcttttacattcaggatcagggtcaagctggagacc
tacaatgatgagtcccgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatacggcagaaggctgattgcgaacatcaggagaaacgcggctatgtga
DBGET
integrated database retrieval system
