Vicugna pacos (alpaca): 102543772
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Entry
102543772 CDS
T08098
Symbol
SPATA13
Name
(RefSeq) LOW QUALITY PROTEIN: spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102543772 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102543772 (SPATA13)
Membrane trafficking [BR:
vpc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102543772 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
102543772
NCBI-ProteinID:
XP_031540531
LinkDB
All DBs
Position
14
AA seq
613 aa
AA seq
DB search
MASPDPADQTPAGGCPRWAQRRRPISVIGGVGVYGGSQTGDTEHLLPQPAARPPVPAHQV
PPYKAVSARFRPLAFSQSTPIGLDRVGRRRQMRASNISSDGGTESSALVDDNGSEEDFSY
EDLCRANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEAS
NKDWWWGRSEEKEAWFPASFVRLRVNQEELSEGSSGTPGEEPEEDAGRNRHKHPESKQQM
RTNVIREIVSTERVYIKHLRDICEGYIRQCRKHTAMFTAVQLGTIFGNIEDIYKFQRMFL
KDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEA
CRLLQQMIDISLDGFLLTPVQKICKYPLQLAELLKYTAPAHSDYNNIKAAYEAMKNVACL
INERKRKLESIDKIARWQVSIVGWEGPDILEQSSELIHSGELTSISRQGRSQQRTFFLFD
HQLVACKKDRLRRDVLYYRGRTDMDAVELVDVXXXXXXXSXARKPEDKARWLQACRDERR
RVQEDRELGMEIPENQKKLAMLNAQKAGHGKSKAHQVAVVCVRRATASRLRKMLLAADEC
GTRSLQLTCIFSE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccggaccctgcagaccagaccccggccggaggctgcccccggtgggcccag
aggagacgccccatctcggtgattggcggggtcggcgtctacgggggcagccagaccggg
gacacggagcatctgcttccccaaccggccgcccggccgcccgtgccagcccaccaggtg
ccgccctacaaggcggtgtcagcccgcttccggccgctggccttctcccagagcactccc
atcgggctggaccgcgtgggacgccggcggcagatgagagcttccaacatttcctcagat
ggagggacggagtcttcggccttagtggatgacaacggcagtgaggaggacttcagctat
gaagacctctgtcgggccaacccccgctacctgcagccaggcggcgagcagctggccatc
aacgagctgatcagcgatggcagtgtggtctgcgccgaggcgctgtgggaccacgtgacc
atggacgaccaggagctgggcttcaaggcgggtgacgtcatccaggtcctggaggcctcc
aacaaggactggtggtggggccgcagcgaggagaaggaggcctggttccctgccagcttc
gtcagactgcgggtcaatcaggaggagctgtcggagggctccagcggcaccccgggcgag
gagccagaagaggacgcgggcaggaaccgccacaagcaccccgagagcaagcagcagatg
aggaccaacgtcatccgggagatcgtgagcaccgagcgcgtgtacatcaagcacctcagg
gacatctgcgagggctacattcggcagtgtcgcaagcacacggctatgttcaccgctgtg
cagctcggcaccatctttggaaacattgaagatatttacaaattccaaagaatgttcctg
aaagaccttgagaaacagtacaataaagaggaacctcatctcagcgaaatcgggtcctgc
tttcttcaacaccaagagggcttcgccatctactccgagtactgcaacaaccacccgggc
gcctgtgccgagctggccggcctgatgaagcagggccggtaccgccacttcttcgaggcc
tgccgcctgctgcagcagatgatcgacatctccctggacggcttcctgctgacgcccgtg
cagaagatctgcaagtaccctctgcagctggccgagctgctcaagtacacggcgcccgcg
cacagtgattacaacaacataaaggccgcctacgaggccatgaagaacgtcgcctgtttg
atcaacgagcggaagcgcaaactggagagcattgacaagatagcgcggtggcaggtgtcc
atcgtgggctgggaggggccggacatcctggagcagagttccgagctgatccactcgggg
gagctgaccagcatcagcaggcagggccggagccaacagcgcacgttcttcctgttcgac
caccagctggtggcctgcaagaaggaccggctgcggagggacgtgctctactaccggggc
cgcacggacatggacgccgtggagctcgtggacgtggnnnnnnnnnnnnnnnnnnnntct
ngagcccggaagcccgaggacaaggcgcggtggctgcaggcctgcagggacgagcgcagg
cgggtgcaggaggaccgggagctgggaatggaaattccggaaaatcaaaagaaactggcc
atgttaaatgctcaaaaggcaggacacgggaagtcaaaagctcatcaagtcgccgtcgtc
tgtgtccgtcgggcaacagcttccaggctgaggaagatgctgttggccgctgacgagtgt
ggtacaaggtcgctgcaactgacatgtattttctccgaatga
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