Vicugna pacos (alpaca): 102543827
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Entry
102543827 CDS
T08098
Symbol
PUM1
Name
(RefSeq) LOW QUALITY PROTEIN: pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102543827 (PUM1)
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Paralog
GFIT
Motif
Pfam:
PUF
SAWADEE
Motif
Other DBs
NCBI-GeneID:
102543827
NCBI-ProteinID:
XP_031539785
UniProt:
A0A6J3AYT2
LinkDB
All DBs
Position
13
AA seq
1191 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRTMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMF
SAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNS
QSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVR
ELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILE
HCLPDQTLPILEELHQHTEQLVQDQYGNXVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQH
KFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA
QRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctgtggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagagacagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctagagggaaga
acaatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacctaacgcccttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcactggcagccgctcatcagccccacatcggtatgttt
tcagcaggtttagctcccgctgcgtttgtccccaatccatacatcatcagtgctgcaccc
ccagggacggacccctacacagctggattggctgcagcagcaacactaggcccggctgtg
gtccctcaccagtattatggagttactccctggggagtctaccctgccagccttttccag
cagcaagctgccgctgctgctgcagcgacaaattctgctaatcagcagaccaccccacag
gctcagcaagggcagcagcaggttctccgtggaggagccagccagcgtcctttgacccca
aatcagaaccagcagggacagcaaacagatccactagtggcagctgcagcagtgaattct
gcccttgcttttggacaaggactggctgcaggcatgccaggttatccagtcttggctcct
gctgcttactatgaccaaactggtgcccttgtggtgaatgcaggagcgagaaatggtctt
ggagctcctgttcgactagtagctcccgccccagtcatcattagttcctcagccgcacaa
gcagctgttgcagcggctgcagcttcagcaaatggagcagctggtggtcttgctggaaca
acaaatggaccatttcgccctttaggcacccagcagcctcagcctcagccccagcagcag
cccagtaacaacctggcatccagctctttctatggcaacaactctctgagcagcaattca
cagagcagctccctcttctcccagggctctgcccagcccgccaacacatccttgggattt
ggaagtagcagttctctcggcgccaccctgggatcagcccttggagggtttggaacagca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcttgacccccattggacacagtttttataacggcctt
agcttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctggga
ggactcacaaatggcagtggaagatacatctctgctgctccaggcgctgaagccaagtac
cgcagcgcgagcagtgcctccagcctcttcagccccagcagcacccttttttcttcctct
cgtttgcgatatggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagat
tttcgaaataaccggtatcccaatttacaactgcgagagatagctggacatataatggag
ttttcccaagaccagcatgggtccagattcattcagctgaaactcgagcgtgccacacca
gctgagcgccagcttgtcttcaatgaaatcctccaggccgcttaccagctgatggtggat
gtatttggaaattacgtcattcagaagttctttgaatttggcagccttgaacagaagctg
gctttggcagaacggattcgtggccatgtcctgtcattggcactgcagatgtatggctgt
cgtgttatccagaaagctcttgagtttattccctcagaccagcagaatgagatggttcgg
gaactagatggccacgtcctgaagtgtgtgaaagatcagaatggcaatcacgtggttcag
aagtgcattgagtgtgtgcagccccagtctttgcagtttatcattgatgcatttaagggt
caggtgtttgctttatccacacatccttatggctgccgagtgattcagaggatcctggag
cattgtctccctgaccagacactccctatattagaggagcttcaccagcacacagagcaa
cttgtacaggatcagtatggaaatntagtaatccaacatgtattggagcatggtcgtcct
gaggataagagtaaaattgtagcagaaatccgaggcaatgttcttgtattgagtcagcac
aaatttgcaagcaacgttgtggagaagtgcgtcactcacgcctcccgtacggagcgcgct
gtgctcatcgatgaggtgtgcaccatgaacgacggtccccacagtgccttatacaccatg
atgaaggaccagtacgccaactacgtggtccagaagatgatcgacgtggcggagccggcc
cagcggaagatcgtcatgcataagatccggccccacatcgcgactcttcgcaagtacacg
tacggcaagcacattctggccaagttggagaaatactacatgaagaatggcgttgactta
gggcccatctgtggcccccctaacggtattatctga
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integrated database retrieval system
