Vicugna pacos (alpaca): 102543841
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Entry
102543841 CDS
T08098
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X5
KO
K17908
autophagy-related protein 18
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04136
Autophagy - other
vpc04140
Autophagy - animal
vpc05010
Alzheimer disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102543841 (WIPI1)
04136 Autophagy - other
102543841 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102543841 (WIPI1)
05014 Amyotrophic lateral sclerosis
102543841 (WIPI1)
05016 Huntington disease
102543841 (WIPI1)
05017 Spinocerebellar ataxia
102543841 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
102543841 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102543841 (WIPI1)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102543841 (WIPI1)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102543841 (WIPI1)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102543841 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_MABP1-WDR62_2nd
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RSE1_2nd
EIF3I
WD40_MABP1-WDR62_1st
DUF5711
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
102543841
NCBI-ProteinID:
XP_006199402
UniProt:
A0A6I9HY65
LinkDB
All DBs
Position
16
AA seq
446 aa
AA seq
DB search
MEAVAADSPPGRVEGALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTVC
TIAAHEGTLAAIAFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLNSSRPEEPSTWSGYVGKVLVAASNYLPAQVSDMMNQ
DRAFATGRLSFSGQRNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
GSGTSEENKENDLRPSLPQSYAATVARPSAAAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKHS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtggccgcggacagccccccaggcagggtcgagggggcgctcagctgtttc
tctttcaaccaggactgcacatccctcgcaattggaaccaaagctggttacaagctgttt
tccttgagttctgtggagcagctggaccaagtccacggaagcaatgagatcccggacgtg
tacatcgtggagcgcctcttctccagcagcctggtagtggtggtgagtcacacaaagccg
cgccagatgaatgtctaccacttcaagaaaggcacggagatctgtaattacagctactcc
agcaacatcttgtccatcaggttgaaccggcagaggctgctcgtttgcctggaggagtcc
atttacattcacaacattaaagacatgaagctgttgaagaccatcctggatatccctgca
aacccaacaggtctgtgtgccctctcaatcaaccattccaattcttacgtggcctatccc
ggaagcctgacgacaggcgagatcgtgctttacgacggacactccctgaaaacagtctgc
acgattgctgcccatgaggggacactggctgccatcgcctttaacgcctcaggctccaaa
ctggcgagcgcatctgagaaaggcactgtcatccgggtgttctcagtacccgacgggcaa
aagctctatgagtttcggagaggaatgaaaaggtacgtaacgatcagctctctggtcttc
agtatggactcccagttcctctgtgcctcaagcaacacggagaccgtgcacatcttcaag
ctggagcatctcaacagcagtcgaccagaagagccttcgacctggagcggctacgtggga
aaggtgctcgtggctgcctccaactacctccccgcccaggtgtccgacatgatgaaccag
gacagggcctttgccaccgggcgtctgagcttctccgggcagaggaacatctgcaccctc
tccacgatccagaaattgccgaggctcttggtcgcatcgtccgacggacacctttacatc
tacaacctggaccctcaggacggaggagagtgtgtcttaatcaagacccacagcttgctt
ggctcaggaaccagcgaagagaacaaagaaaatgacctcaggccttcattacctcagtct
tatgctgcaaccgtagcccgaccgagcgcagctgcggcctccacagtgccgggttactcc
gaggacggcggggcgctccgaggagaggttattcctgaacacgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagttcccccctataatcttgtgccgcggaagtcagaag
ggcaaaacgaagcactcctga
DBGET
integrated database retrieval system
