Vicugna pacos (alpaca): 102544192
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Entry
102544192 CDS
T08098
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X2
KO
K05236
coatomer subunit alpha
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102544192 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpc04147
]
102544192 (COPA)
Membrane trafficking [BR:
vpc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102544192 (COPA)
Exosome [BR:
vpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102544192 (COPA)
Exosomal proteins of bladder cancer cells
102544192 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
102544192
NCBI-ProteinID:
XP_006215714
UniProt:
A0A6I9IM27
LinkDB
All DBs
Position
21
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSMASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDLPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKDTLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFRGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaagttcgagaccaagagcgcgcgggtcaaagggctcagttttcacccaaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctgattgacaagtttgatgaacatgatggtccagttcgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactatattcgcaccacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacggggcacaaccattatgtaatgtgt
gctcagttccacccctcagaagacctggtcgtatcagccagtctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcggtggaatcggat
gtaagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctggagggtcatgatcgcggagttaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattacaacaatgtgtcttgtgctgtcttccaccctcgc
caggagttgatccttagcaattctgaggacaagagtatccgagtctgggatatgtcaaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cctaaccttaacctctttgcagcaggtcatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcacggcaacatgctacattacgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagctgcggagtggt
tccaagtttccagtgttcaacatgtcctacaatccagcagaaaatgcagtcctgctgtgt
acaagagccagcaatttagagaatagtacctatgacttgtacactatccccaaggatgcc
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaagtacaggtgcccaactgtgatgagatcttttacgctggc
acaggcaacctcctgcttcgagacgcagaatccatcacactctttgatgtacagcagaag
cggactctggcttctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccacgtagcactactggccaaacatgagcactcatgtcctttgcctcttacagccatt
gtgatctgtaaccgcaaactggaggcactatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggagactacgggatcatccgaaccctggatttacccatctatgtcaca
cgggtgaaaggcaacaatgtatattgcctagacagggagtgccgccctcgggtgctcacc
attgatcccacagaattcaagttcaagttggccctgatcaacagaaaatacgatgaggta
ctacacatggtgaggaatgccaaactagtaggccagtctatcattgcttatctccagaag
aagggatatcctgaagtggcactgcattttgtcaaggatgagaaaactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaaa
aactgctgggaaaagttgggagaagtggctctgctacaggggaaccaccagattgtggaa
atgtgttatcagcgcaccaaaaactttgacaaactttccttcttatacctaatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgccctatacctgggagacgtgtcagagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcatatctcacagctgctacccatggcttagatgaggaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagacattgatcctaat
gccaagctgcttcagccgcctgcacctatcatgccattggataccaactggcccttattg
actgtgtccaaagggttctttgaaggctctatggccagcaaggggaagggaggagcactg
gctgctgacattgacattgacactgttggtactgagggctggggagaggatgcggagctg
cagctggatgaagatggatttgtggaagctacagaaggtttgggggatgatgctcttggc
aagggacaagaagaaggaggtggctgggatgtggaagaagatctggagctccctcctgag
ctggatctaccccctggggcagctggtggggctgaggatgggttctttgtgccccccacc
aagggaaccagcccaactcagatctggtgcaataactctcagcttccagttgatcacatc
ttggcaggctcttttgaaacagccatgcggctccttcatgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgtaccacctatcag
gctctgccctgcctgccctccatgtatggctaccctaatcgcaattggaaagatgcaggg
ctgaagaatggtgtgccagctgtgggcctgaagcttaacgacctcatccagcgactgcaa
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgttcc
attttgctcagtgtgccacttcttgttgtggacaataaacaggagattgcggaggcccag
cagctcatcaccatttgccgtgagtacattgtgggtttgtccatggagatagaaaggaag
aagctgcccaaagacactctagaacagcagaagcgcatctgtgagatggcagcctacttc
acccactcaaacctgcagccagtgcacatgatcctggtgctgcgtacagccctcaacctc
ttcttcaagctcaagaactttaagaccgctgccacctttgctcggcgactgttggaactt
gggcccaaaccagaggtggctcaacagacccgtaaaatcctgtctgcctgtgagaagaac
cccacagatgcctaccaactcaattatgacatgcacaacccttttgacatctgcgctgca
tcttatcggcccatttaccgtggaaagccagtagagaaatgtccactcagcggagcctgc
tattcccctgagttcaggggtcagatctgcaaggtcaccacagtgacagagattggcaaa
gatgtgattggtttaaggatcagtcctctgcagtttcgctaa
DBGET
integrated database retrieval system
