Vicugna pacos (alpaca): 102544530
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Entry
102544530 CDS
T08098
Symbol
SNTB1
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04820
Cytoskeleton in muscle cells
vpc05410
Hypertrophic cardiomyopathy
vpc05412
Arrhythmogenic right ventricular cardiomyopathy
vpc05414
Dilated cardiomyopathy
vpc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102544530 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
102544530 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
102544530 (SNTB1)
05414 Dilated cardiomyopathy
102544530 (SNTB1)
05416 Viral myocarditis
102544530 (SNTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102544530
NCBI-ProteinID:
XP_006211482
UniProt:
A0A6I9IIQ3
LinkDB
All DBs
Position
25
AA seq
532 aa
AA seq
DB search
MAVAAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAASNG
LGTATNGSFCRGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELGGLGIS
IKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGKE
VLLEVKYMREATPYVRKGSPVSEIGWETPPPESPRLGGSSSDPLSSQSLSFHRDRKSIPL
KMCYVTRSLALADPENRQLEIHSPDAKHTVVLRSKDSATAQAWFSAIHSNVSDLQTRVVA
EVREQLGKTGIAGSREIRHLGWLAEKVPGDSEKQWKPALVVLTDKDLLIYDSMPRRKEAW
FSPVHTYPLLATRLVHSGPGKGSPQAGVDLSFATRTGTRQGIETHLFRAEISRDLSHWTR
SIVQGCHNSAELTTEITAACTYKNQECRLTIHYDNGFSLTTEPQEGAFPKTIIQAPYEKL
KMSSDDGIRMLYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcagcggcggcggggccggccggcggcggaggcggccgg
gcgcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctggtg
aacttgagcgaggacgccctggttctgagctgtgaggagggcgctgcggcgtccaacggc
ctcgggaccgccaccaatggctcgttctgcaggggcgccggcggcgcgcagcccccggac
tcgcccgccggggtccgcaccgccttcaccgacctgcccgagcaggtgcccgagtccatc
tcgaaccagaagcgtggcgtgaaggtgctgaagcaggagctgggcgggctgggcatcagc
atcaaggggggcaaggagaacaagatgcccatcctcatcagcaagattttcaaggggctg
gcggcggaccagacccaggccctgtacgtgggcgacgccatcctgtcagtgaacggggcc
gacctgcgggacgccacccacgacgaggcggtgcaggcgctgaagcgcgctggcaaggaa
gtgctgctggaagtgaagtacatgcgagaagccacgccctacgtgaggaaaggctccccg
gtgtccgagatcgggtgggagacgcctccgcctgagtcccctcggttggggggcagctcc
tccgacccgctgtcgtcgcagtccctctccttccacagagaccggaagagcatcccgctc
aagatgtgctacgtcacgcggagcctggccttggccgaccccgagaacaggcagcttgaa
atccactctccagatgctaagcacacggtggtcctcaggagcaaggactcagccaccgcc
caggcctggttcagtgccatccattccaacgtcagtgacctgcagacccgagtggtcgcc
gaggtccgagagcagctggggaagacgggcattgctgggagccgagagatcaggcatctt
ggctggcttgcagaaaaggtgcctggggacagtgagaaacagtggaagccagcgctggtt
gtactgacggacaaggacctgttaatttatgacagcatgccacggaggaaggaagcctgg
ttcagcccagtccacacgtaccctcttcttgccaccaggctggtccattcaggtccaggg
aaaggatcgccccaggctggcgtggatctgtccttcgcaacacgaactggtacccggcag
gggattgaaacacatctattcagggctgagatcagcagggacctctcacactggacaagg
agcatcgtacaggggtgccacaactcagctgaactgactactgaaattaccgcagcttgc
acctacaaaaaccaggagtgccgcttgaccatacattatgacaatggattttctcttacc
actgaaccacaggagggtgcctttcccaagacaatcatacaggctccttatgaaaagctg
aaaatgtcttcagatgatggaatcaggatgctgtacttagattttggaggcaaagatgga
gagattcaactggaccttcattcctgccccaagccgattgttttcatcatccattccttc
ctgtcagctaagattacaagactgggtttggtggcctga
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