KEGG   Vicugna pacos (alpaca): 102544784
Entry
102544784         CDS       T08098                                 
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
  KO
K15009  SH3 and multiple ankyrin repeat domains protein
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04724  Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    102544784 (SHANK1)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 SAM_1 Ank_5 SH3_2 SAM_2 PDZ_6 PDZ SH3_1 SH3_9 FERM_f0 SAM_PNT
Other DBs
NCBI-GeneID: 102544784
NCBI-ProteinID: XP_031537982
LinkDB
Position
11
AA seq 1630 aa
MTNSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAPGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGTPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSGEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEEIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
GPFNPGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQP
HHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTAGLPPVPPPAVAAAP
PTLDSTASSLTSYDSEVATLTQGAPAAPGDPPPPGPPAPSRPRSPLPPQPGPDPPPGTDS
GIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGVGGGAGVASGPELLDTYVAY
LDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTSTSPTVSVTG
AGTDGLLALSGCSGPSTVGVSGGPVAGEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPL
PGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASY
VPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVPPSAAAAPGATSP
SASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPG
LFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFG
AKPLGFWTKFDVADWLEWLGLSEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNI
DRALKFFLER
NT seq 4893 nt   +upstreamnt  +downstreamnt
atgaccaacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccagggagaggcccccgggggacc
cggggccggggcagcggggcacctggtagcctggcctcaatccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtctttaggattggcatcccg
gacctgcaccagacgaaatgcttgcgctttaaccctgatgccaccatctggacagccaag
cagcaggtactttgtgccctgagcgagagcctgcaggacgtgctcaactacggcctattc
cagccggccacctcgggccgggatgccaatttcctggaggaggagcggctgctgcgggag
tacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacaccaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtccgacaaggtggcacggctgctggac
aaggggctggaccccaattaccatgactcggattcaggagagacccccttgacgctggct
gcccagacagaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccacatc
gacttccgggcccgggatggcatgacagcgctgcacaaggccgcgtgtgcccgtcactgc
ctcgctctcacggcgctcctggaccttgggggctcccccaactacaaggatcgccggggg
ctgactcctctgttccatacggccatggtggggggcgacccccgctgctgtgagctgctc
ctatacaacagggcccagctgggcatagctgatgagaacggctggcaggagatccaccag
gcctgtcagcggggtcactctcagcatctggaacacctactcttctacggggctgagcct
ggagcacagaacgcctcggggaatacggccctgcacatctgtgccctctacaataaggag
acctgtgctcggatcctcctctatcgaggtgccaacaaggatgtaaagaataacaacgga
cagaccccctttcaggtggcagtgattgctgggaattttgaactaggggagctgatccga
aaccaccgagaacaggacgtggtgcccttccaggagtcccccaagtacgcagcccggcga
cggggaaccccaggcgcagggctgacggtgccccccgcgctgctccgggccaacagtgat
accagcatggccctgccagactggatggtgtttgccgccccggggacctcatctgccggg
gctcctggccctacctcagggcctcagggccagtcgcagccctcggcccccagcaccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgtgggaggcaccccgaggaggccaagaggcagccccgtggacggcccagctccagc
ggaacaccccgggaagggccagctgggggcacagggggctcaggggggcccgggggctcc
ctgggcagccgcgggagacgccggaagctctactcagcagtccctggacgctccttcatg
gctgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatt
ggctggttcccctctgactgcctggaagaggtggcaaaccgctcccaggagggaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctatgac
agctttgatgccccaagcttaatggatgggattggcccagggagcgattacatcattaag
gagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcgctgcag
tatctggagtcagtggacgagggtggtgtggcatggcgagctggactgcgaatgggagac
ttcctcatcgaggtgaatgggcagaatgtggtgaaggttggccaccgacaggtggtgaac
atgatccgccaagggggcaacaccctgatggtcaaggtggtgatggtcacaaggcacccg
gacatggatgaggctgtacataagaaagcaccccagcaggctaagaggctcccaccccca
accatctccctgcgttccaagtctatgacctcagagctggaggagatggtctccccctgg
aagaagaagagtggtgagtacgagcagcagcctgcgccggtgcccagcatggagaaaaag
cggaccgtgtatcagatggctctcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctgggcctggtggcctcgcgtccctgggcaaacaccga
cccaaaggcttctttgccactgagtcaagctttgacccccaccaccgctcccagccaagt
tacgaacgtccctcctacctgcctccaggacctgggctcatgctccggcaaaagtctatt
ggggctgcagaagatgacagaccctacctagcacccccggccatgaagttcagccgcagc
ctgtctgtgcctggttcggaggagatccccccgccgcccaccacgtccccaccagagccc
ccctacagcacacctccggccccttcctcctccggtcgcctcacgccgtctccccggggt
gggcccttcaaccccggtggccccctccccgcctcttccccggcatcctttgatgggccc
tcccctcctgacacccgtgtaggaagccgtgagaagagcttgtaccacagcgggcccctg
ccccccgcccaccatcacccgccccaccaccaccaccatcacgctccgcccccccagcca
caccaccaccacgcccacccccctcatcccccggagatggagacgggcggttctcccgac
gatcccccaccccgattggctctggggccccagcccagcttgcgaggctggcggggcggc
gggcccagcccgaccgcggggctgccccctgtgccgccccctgctgttgccgccgccccg
cccaccctggactccaccgcatccagcctgacttcctatgacagcgaggtggcaacgctg
acccagggggcccctgcggctcccggcgacccccctccgcctggcccaccagcccccagc
cgcccccggtcccccctgcccccacagcctggcccagaccctccgcctggcacggattct
ggtattgaggaggtggacagtcgaagtagcagtgaccaccctctggagaccatcagcagc
gcatccacgctgagcagcctgtctgccgaaggcggtggcagtgcagggggtggcggtggt
gttggtggtggggccggtgtagccagtgggccagagcttctggacacgtatgtggcctac
ctggatggtcaggccttcggagggagtggtacccctgggccaccatacccaccgcagctc
atgactccctctaagctccggggccgggcactaggggccagtggaggcctgcggcctggc
cccagtgggggactccgagaccctgtcacttccaccagccccactgtctcagtgacgggg
gctggaaccgatgggctgctggccctgagtggttgctcaggaccctcaacagtaggtgtg
tccgggggtccagtggctggagagccagaaggcccaccggtgcccctaccgtcagcctcc
tccctgcctcggaagctgctgccctgggaggagggcccgggcccaccgccaccacccttg
cccgggcccctagcccagcctcaggcctcagccttggccacagtcaaagccagcatcatc
agtgaactcagctccaagcttcagcagtttgggggctcctcggcagctggtggcgctctg
ccctgggcccggggaggcagcgggggaagcggggacagccaccacgggggagccagctac
gtccccgagaggacttcctccctgcagcggcagagactctccgaagactcccagtcctcg
ctcctctccaaacccgtcagcagcctgtttcagaactggcccaaaccacctctgccgcca
ctccccacaggaaccggggtgcccccttcagctgctgcagccccaggggccacctcgcca
tcggcctcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcgg
ccgcctttgctccgccgggcccccagcccctcactgctgcctgcctcggagcacaaggtc
agccctgcgccccggccctcatccctgcccatcctgccttccggacccctctatccgggc
ctcttcgacatccgtggctcccccacaggaggggcaggaggctcggctgaccccttcgcc
cctgtctttgtgccaccacaccccgggatgtccgggggtcttgggggagccttgtcaggg
gcctcccgctccctctcaccaacccgcctgctttccttgcccccggacaagccgttcggc
gctaaacctctggggttctggaccaagttcgacgtggctgattggcttgaatggctgggc
ttgtctgagcaccgagcccggttcctggaccatgaaattgatggctctcacctgcccgcc
ttgaccaaggaggactacgtcgatctgggtgtgacccgagtgggtcaccgcatgaacatc
gaccgggctctcaaatttttcctggagaggtga

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