KEGG   Vicugna pacos (alpaca): 102544835
Entry
102544835         CDS       T08098                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04530  Tight junction
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102544835 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpc03000]
    102544835 (YBX3)
   03041 Spliceosome [BR:vpc03041]
    102544835 (YBX3)
Transcription factors [BR:vpc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    102544835 (YBX3)
Spliceosome [BR:vpc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    102544835 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 102544835
NCBI-ProteinID: XP_031526384
UniProt: A0A6J2ZY74
LinkDB
Position
34
AA seq 497 aa
MPNSGANSPHPLPSRADRARSPRASAQPESSSRLRRPRREIRTGLPESEPRPPRPAAALT
ADQPPARARKLGSWVPETGTVARSGGEAGPDAKGQGAAVGRKDPGLGCMWMEGWDRGTGT
RPCCCRPHAGREVLQSSPGNLALGPASSSLSEPAAAENRSVFTNRYTLSSSWIVGKHFVQ
QLKKLPRKCGNDVSSQHRYLGTGQILIYLLNPILATKVLGTVKWFNVRNGYGFINRNDTK
EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD
RRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDGQFPGARSQLRRPQYRPQYR
RRFPPYHVGQTSDRRSRAFPHPSRMQAGEIGEIKDGVPDGAQLQGPVHRNPTYRPRFRRG
PPRPRPAPAAGEAEDKENQQAASGPNQPSVRRGYRRPYNYRRRPRPPNAPAQDGKETKAG
DAPSENPAPATEQSSAE
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgcccaactccggagccaactctccccaccctcttccctccagggccgatcgagcgagg
agcccaagagcgagcgcgcagcccgagagctcgagccgcctccgccgcccgcgccgcgag
atccgcaccggccttcccgagagcgagccccggccgccgcgaccagcagccgcgctaacc
gccgaccaaccgccagcgagggcccgcaagctggggtcttgggtccccgagacgggcact
gtcgcacgctccggcggcgaagcaggcccggatgcgaaggggcaaggagcggcagtcggg
aggaaggacccggggttgggatgcatgtggatggagggatgggacaggggcacgggaacc
aggccatgctgctgtcggccacatgccggcagagaggtgttgcaatcctctccgggaaac
ttggctctgggtcccgcgtcctcctccctctctgagcccgctgctgcagagaaccgttca
gtgtttaccaatcgctacacgttgtcttcttcctggattgtgggaaagcatttcgtgcag
cagctgaaaaaacttcctcggaagtgtggaaatgacgttagttcacagcatcgttatctt
gggactggtcagatactaatttatctgcttaatcctattttagccaccaaagtccttggc
actgtcaaatggttcaacgtcagaaatggatacggatttataaatcgaaatgacaccaaa
gaagatgtatttgtccatcagaccgccatcaagaaaaataacccacggaaatatctgcgc
agtgtaggagatggagaaactgtagagtttgatgtggtcgaaggagagaagggggcagaa
gcagccaacgtgaccggcccggatggagtgcccgtggaagggagccgctacgctgcggac
cggcgccggtaccgccgcggctactacggccgccgccgggggccgccccgcaattacgct
ggggaggaggaggaggaagggagcggcagcagtgaaggatttgacccccctgccactgac
gggcagttccctggcgcccggagtcagctgcgccgcccccagtatcgccctcagtaccgg
cggcggttcccgccttaccacgtgggacagacctctgaccgccgctcccgggcctttccc
catcccagcagaatgcaggctggtgagattggggagataaaggatggagttccagacgga
gcacaacttcagggaccagtccatcggaatccgacttaccgcccgaggttccgtaggggc
cctcctcgcccacgacccgccccagctgctggagaggctgaagataaagagaatcaacaa
gctgccagtggtcccaaccagccgtctgttcgtcgtggataccggcgcccctataactat
cggcgccgcccccgccctccgaacgctcctgcacaagatggcaaagagaccaaggcaggc
gacgcgccatctgagaaccccgctccggccaccgagcagagcagtgctgagtga

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