Vicugna pacos (alpaca): 102544963
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Entry
102544963 CDS
T08098
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03030
DNA replication
vpc03410
Base excision repair
vpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102544963 (POLE)
03410 Base excision repair
102544963 (POLE)
03420 Nucleotide excision repair
102544963 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpc03032
]
102544963 (POLE)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102544963 (POLE)
Enzymes [BR:
vpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102544963 (POLE)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102544963 (POLE)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102544963 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
102544963
NCBI-ProteinID:
XP_031526015
UniProt:
A0A6J2ZVM1
LinkDB
All DBs
Position
32
AA seq
2286 aa
AA seq
DB search
MVLRNTGRRRAEPGADGEASRDDGPSSSVSALRRLERSQWTDKMDMRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYVATRRGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNREQ
SHASDAYTAMLSSVLQGGSVITDEEEASKKIADQSDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLLQRWFEHVQETKPTIVV
TYNGDFFDWPFVEARAAVNGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKTKLSSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEAGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIM
VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVCKQKKISELFVLEGKRQVGVAQA
SGGAQSLAAPDMEDFGLVKPLPSAVPVATKRKRILWESQEESQDLELTMPWQEILGQPPA
LGSTQEEWLVWLRFHKKKWQLQARQRLAHKRRRRLEAAEGAPRPGAIREGPSAGLGGFFR
RTARSILDLPWQIVQISETSQPGLFRLWAVISSDLYCIKLSIPRVFYVNQRVAKTEAGPS
YRKVNRVLPRSNTVYNLYEYLVPEDMYQEHINEINTELAAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHLSGWEAETFSLEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGHKALF
GVFVPSQRKASVFVLDTVRSNQMPNLSTLYSVEHSLLLEKVGPELLPPSKHTFEVRAETD
LKVICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAGEVPVLEEFPLVPVRVADKISYG
VLDWQRYGARRMIRHYLNLDTCLSQAFEMSRYFHVPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTLRPDLGGKEADDNRLVMEFDDQAAMEINSSGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGADSVGVSFDVIQQASLEDMITGNQAASAPASYDETALCSSTFRILKSMVV
GWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRWVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGNVPSSIHCGQRDSPKEGRAEEEGEPEEEEEEEQEQEEEGTQELDVEDLLENNW
NILQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSTPGSTPVRRRGASQLSQEAQAG
AGALPGMITFSQDYVANELTQNFFTITQKIKKKVTGSRNLTELSEMFPVLPGSHLRLNNP
ALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFQDPCRSYVLPEVICRS
CNFCRDLDLCKDPSFSQDGAVLPQWLCSNCQVPYDSSVIEMALVEALHKKLMAFTLQDLI
CLKCRGVKETNMAVYCSCAGGFSLTIHTKVFMEQIGIFRNIAQHYGMSYLMETLEWLLQQ
NPELGH
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacaccgggcggcggcgcgcggagccgggcgcggacggtgaggccagc
cgggacgatggcccctcttcctcagtctcagcactcaggcgcctggagcgcagtcagtgg
acggataagatggacatgcggtttggttttgagagactcaaagagcctggtgagaagaca
ggctggctgatcaacatgcaccctactgagattttagatgaagataagcgcttagttagc
gcggtggattactactttattcaagatgatgggagcaggtttaaggtggccttgccctac
aagccatatttctacgttgcaaccagaaggggttgcgagcgagaagtttcgtcttttctc
tccaagaagtttcagggtaaaattgcgaaagtagagactgtccccaaagaggatctggac
ctgccaaatcacttggtgggtttgaagcgaaattacattaagctgtccttcaacactgtg
gaggaccttgtcaaagtgaggaaggagatctcccctgctgtgaagaaaaaccgggagcag
agccatgccagcgatgcatacacggctatgctctccagtgttctacaagggggcagcgtg
attactgatgaagaggaagcctctaagaagattgctgaccagtcagacaacattgtagac
atgcgagagtacgacgtgccctaccacatccgcctctccatcgacctgaagatccacgtg
gctcactggtacaatgtcagataccgaggaaatgcctttcctgtggaaattacccgccga
gatgacctcgttgaacgacctgaccctgtggttttagcatttgacattgagacgaccaaa
ttgcccctcaagtttcccgacgctgagactgaccagattatgatgatttcctatatgatt
gatggtcagggctacctcatcaccaacagggagatcgtctcagaagacatagaggatttc
gagttcacccccaagccagaatacgaagggcccttctgtgtcttcaatgagcctgatgag
gttcatctactccagagatggttcgaacatgtccaggagaccaaacccaccatcgtggtc
acctataatggggacttctttgactggccatttgtggaggccagagcagcagtcaacgga
ctgagcatgtaccaggagatagggttccagaaggacagccagggggagtacaaggcaccc
cagtgcatccacatggactgtctcaggtgggtgaaaagggacagttaccttcctgtgggc
agccacaacctcaaggcagctgccaaagcaaagctgggctatgaccctgtggaactggac
cccgaagacatgtgtaggatggccaccgagcagccccagacgctggccacttactctgtg
tcggacgcggtggccacgtactacctgtacatgaagtacgtccacccctttatatttgcc
ctctgcaccatcatccccatggagcctgatgaggtgttgcggaagggctctggaacgctg
tgtgaggccctgctgatggtgcaggccttccacgccaacatcatcttccccaacaagcag
gagcaggagttcaacaaactgacagatgatggccacgtgctggatgcggagacctacgtg
gggggccacgtggaggccctggagtcgggcgtgttccgcagtgacatcccctgccggttc
cggatgaatcctgccgcgtttgacttcttgctgcagcgggtggagaagaccatgcgtcat
gccattgaggaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgt
gaccagattaagaccaagctcagttccctgaaagatgtccctaaccggattgagtgtcct
cttatctaccacctggacgtgggggccatgtaccccaacatcatcttgacgaaccgcctg
cagccctctgccatggtggacgaggctacctgtgctgcctgtgacttcaacaagcctgga
gcaaactgccagaggaagatggcctggcagtggaggggcgagttcatgccagccagtcgc
agtgagtatcatcggatccagcaccagctggagtcagagaagttccctcctttgaccccg
gagggccccgctcgggcctttcacgagctgtcccgtgaggagcaggccaagtacgagaag
aggaggctggcagattactgccggaaggcgtacaagaagatccatgtgaccaaggtggag
gagcgtctcaccaccatctgccagcgggagaactctttctatgtggacacagtgcgcgct
ttccgggacaggcgctatgagttcaaaggtctccacaaggtgtggaaaaagaagctctcc
gcagccgtggaggcgggggacgcagctgaggtgaagcgctgcaggaacatggaggtcctg
tacgactccctgcagctggcacacaagtgcatcctcaactccttctacggctacgtcatg
cgcaagggggcccgctggtactccatggagatggccggcatcgtctgcttcacgggggcc
aacattatcacgcaggcacgggagttgattgagcagattgggaggcccttagagctggac
acagatggaatatggtgcgtcctgcccaacagcttccccgaaaactttgtcatcaagaca
accagtgtgaaaaagcccaaggtgaccatctcctaccctggggctatgttaaacatcatg
gtcaaggaaggcttcaccaatgatcagtaccaggagctggctgagccctcctcactcacc
tatgtcacccgctcagagaacagcatcttttttgaggttgatggaccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaagctgaagaagaggtacgccgtgttcaat
gaggatggctccctggctgagctcaagggcttcgaagttaaacgccgcggggagctgcag
ctgattaagatcttccagtcctcggtgttcgaggccttcctcaagggcagcaccctggaa
gaagtgtacagctctgtggccaaggtggctgattactggctggacgtgctgtacagcaag
gcagctaacatgcctgattcggagctgtttgagctgatctctgagaaccgctccatgtct
cggaagctggaagattacggggagcagaagtccacgtccatcagcacagccaagcgcctg
gccgagttcctgggagaccagatggtgaaggatgctgggctgagctgccgctacatcatc
tcccggaagcctgaggggtctccagtcacagagagggctattccactcgccattttccag
gccgagcccacagtgaggaagcactttctccggaaatggctgaagagttcttcccttcaa
gactttgatattcgtacaattctggattgggactactacattgagcggctgggaagtgcc
atacagaagatcatcacaatccccgcagccctgcagcaggtgaagaacccagtaccgcgc
gtcaaacaccccgactggctgcacaaaaaactgctggagaagaatgatgtctgcaagcag
aagaagatcagtgagcttttcgtccttgagggcaagagacaggtgggagtggcacaagcc
tcgggtggtgcccagagccttgctgctcctgacatggaggactttggcctcgtgaagccg
ctcccctcagcagtccctgttgctactaagaggaagcgcatcctctgggagagccaggag
gagtcgcaggacctggaactgacgatgccttggcaggagatcttggggcagcctccggcg
ctcgggagcacccaggaagagtggctggtgtggctccggttccacaagaagaagtggcag
ctgcaggctcgacagcgcctggctcacaagaggaggcggaggctggaggcggcagagggc
gcaccgaggcctggggccatccgtgaggggccctccgcagggctggggggcttctttcga
agaactgctcgcagcattcttgaccttccgtggcagattgtgcagatcagcgagaccagc
cagcctggcttgttcaggctgtgggctgtcatcagcagtgacctgtattgcatcaaactg
agcatcccccgggtgttctacgtgaaccagcgtgtggccaaaacggaggcaggcccttcc
tatcgaaaggtgaatcgagttcttcctcgctccaacacggtctacaatctctatgagtac
ttggtgccagaggacatgtaccaggaacacatcaatgagatcaacactgagctggcagca
ccagacatcgagggcgtgtatgagactcaggttccgttattgttccgggccctggtgcag
ctgggctgtgtgtgtgtggtcaacaagcagctggtgaggcacctttcaggctgggaagcg
gaaaccttctctcttgagcacctggagatgcgctctctggcgcagttcagctacctggag
ccagggagcatccgccacatctacctgtatcatcacgcacagggccacaaagctctcttc
ggcgtcttcgtgccctcacagcgcaaggcatctgtgtttgtgttggacactgtacgaagc
aaccagatgcccaatctcagcaccttgtactcagtggagcacagcctcctgctggagaaa
gtgggccctgagctcctgcccccatccaaacacacttttgaagttcgggctgaaaccgac
ttgaaggtcatctgcagagccatccagcgcttcctgctggcctacaaagaggagcgccga
gggccgacactcatcgccgttcagtccaactgggagctgaagagactggctggtgaggtt
cccgtcctggaggagttcccactagtgcctgtgcgtgtggctgataagatcagctacggg
gtcctggactggcagcgctacggagcccggcgcatgatccggcactacctcaacctggac
acttgcctatcacaggcctttgagatgagcaggtacttccatgtccccgttgggaacctg
cctgaggacatctctacctttggctccgacctcttctttgcccgccacctccagcgccac
aaccacctgctctggctgtctcctaccctgcgccctgacttgggtgggaaggaggctgat
gacaaccggcttgtcatggagtttgacgaccaggccgcgatggagatcaacagttcaggc
tgttactccacagtgtgcgtggagctggacatccagaacctggccgtcaacaccatcctg
cagtcgcaccacgtcaatgacatggagggggccgacagtgtgggtgtcagcttcgatgtg
atccagcaggcctccctggaggacatgatcaccggcaaccaggccgccagcgcccccgcc
agctacgacgagacggccctctgctcgagcactttcaggatcctgaagagcatggtggtg
ggctgggtaaaggagatcacacagtaccgcaacatctacgccgacaaccaggtgatgcac
ttctaccgctggctccggtccccgtcctcgctgctccacgaccctgcgctgcaccgcacg
ctgcacagcatgatgaagaagctcttcctgcagctcattgctgagttcaagcgcctgggg
tcatcggtggtctatgccaacttcaaccgcatcatcctctgcaccaagaagcggtgggtg
gaagacgcccttgcctacgtggagtatatcaccaacagcatccattctaaagagatcttc
cattctttgactatttctttctctcgatgctgggaatttcttctctggatggacccctct
aactatggtggaatcaaagggaatgttccatctagtattcactgtggacagcgggactcc
cccaaagagggcagagccgaggaggagggggagcctgaagaggaggaggaggaggagcag
gagcaggaggaggaaggcacacaggagctggatgtggaggacttgctggaaaacaactgg
aacatcttgcagtttctgccacaggcagcctcctgccagagctacttcctcatgattgtt
tccgcctacatcgtggccgtgtaccacagcatgaaggaggagctgaggcgcagcacccca
gggagtaccccggtgcggaggaggggggctagccagctctcccaggaggcccaggcgggg
gccggagccctccccgggatgatcaccttctcacaagactatgtggcgaatgaactcact
cagaacttcttcaccatcactcagaaaattaagaagaaagtcacaggctctcggaacttg
accgagctctcagaaatgtttcctgtcctccccggttctcacttgcggctcaataaccct
gctctggagttcatcaaatacgtgtgcaaggtcctgtctctggacacgaacatcacaaac
caggtgaacaagctgaaccgagacctgcttcgcctggtagatgtcggcgagttctcagag
gaggcccagttccaagacccctgccgctcgtacgtgctccctgaggtcatctgccgcagc
tgcaacttctgccgggacctggacctgtgcaaagacccctccttctctcaggatggggct
gtgctgcctcagtggctctgctccaactgtcaggtcccctacgactcttcagtcatcgag
atggccctggtggaagccctgcataagaaactgatggccttcaccctgcaggacctgatc
tgcctgaagtgccggggtgtgaaggagaccaacatggccgtgtactgtagctgtgccggg
ggcttctccctcaccatccacaccaaggtcttcatggagcagattgggatcttccggaac
attgcccagcactatggcatgtcgtacctcatggagaccctggagtggctgctgcagcag
aaccccgagctaggccactag
DBGET
integrated database retrieval system