Vicugna pacos (alpaca): 102545020
Help
Entry
102545020 CDS
T08098
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X5
KO
K14966
host cell factor 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03083
Polycomb repressive complex
vpc04980
Cobalamin transport and metabolism
vpc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102545020 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
102545020 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102545020 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vpc01009
]
102545020 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102545020 (HCFC1)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102545020 (HCFC1)
Protein phosphatases and associated proteins [BR:
vpc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102545020 (HCFC1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
102545020 (HCFC1)
HMT complexes
COMPASS/SET1 complex
102545020 (HCFC1)
MLL-HCF complex
102545020 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
102545020 (HCFC1)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102545020 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
102545020
NCBI-ProteinID:
XP_006218563
UniProt:
A0A6I9ITM1
LinkDB
All DBs
Position
X
AA seq
2049 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAATAPPTTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGSH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAVQHSCSNPPCETHETGTTSTATTAMSSIGAGQRRDARLACA
ASTVPTVVRVSVAAGVSEGAQSLVKAACQTRQTSATSTTMTVLATGAPCPASPLLRPSLA
LEAGGHSATLVQLGPVSARVRPSGQDSPVTGLGQLVPVGRQLEAHHTHTTNSPATAHSTV
GAGEPGEAQGTPMLVYEGAPSATVTATALGSLLCPSATVTQVCSNPPCETHETGTTNTAT
TSNAGSAQRVCSNPPCETHETGTTHTPTTATSSGGAGQPEGGQQPPASRPCETHQTTSTG
TTMSVSVGAMLPDTTPSHRTLESSLEVVAPPAVTPQVGAALLAPFPTQRVCSNPPCETHE
TGTTHTATTVTSNMSSNQDPPPPASDQGEVESTQGDSVNMSSSGPITTTVSSTLTRAVTT
VTQSTPVPGPSVPPPEELQASPGPRQQLPPRQLLQPAPAPLVGASAEVLPASQAPELQAA
VDLSSTGDPSSGQEPASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTG
LTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAE
LSHLSAEGQEGQATTIPIVLTQQELAALVQQQQLQEAQAQQQQHHLPTEALAPADSLNDP
AIESNCLNELAGAVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVAN
GIESLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPDDVVQSDDDSGTVP
DYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGA
HLTWEPPSVTSGKIIEYSVYLAIQSSQAGGEPKSAPPAQLAFMRVYCGPSPSCLVQSSSL
SNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGAKPASKRPMSSPEMKSA
PKKSKADGQ
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcacccgccaactcgccagcggtgctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgcgccgtggcc
atcaaggagctcatcgtggtgtttggcggcggcaacgaggggatagtggacgaactgcac
gtgtacaacacggcaaccaaccagtggttcatcccagctgtgagaggggacatccctcct
ggatgtgcagcctatggctttgtgtgcgacgggactcggctgctggtgttcggagggatg
gtggagtatgggaagtacagcaacgacctctatgagctccaggcaagccgttgggagtgg
aagagactcaaagcaaagacgcccaaaaacgggccccctccatgtcctcggctcgggcac
agcttctcccttgtgggcaacaaatgctacctgtttgggggtctggccaatgatagcgag
gaccccaagaacaacattccgaggtacctgaacgacttatacatcctggaattgcggcca
ggctccggtgtggtagcctgggacattcctatcacttacggcgtcctccccccgccccgg
gagtcccacaccgctgtggtatacactgagaaagacaataagaagtccaagctggtgatc
tacggggggatgagtggctgccggctgggggacctctggaccttggatattgagactctg
acgtggaataagcccagtctcagtggcgtggcacctcttccccgaagccttcactcggcc
acgaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggatactatggcctgggagaccatcctgatggacacactggaggacaacattccccgg
gcccgagctggccactgtgccgtagcaatcaacactcgcctgtacatttggagtgggcgc
gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctctggtacctggaa
acagaaaagccaccacccccggcccgggtacagctggtgcgagccaacaccaactccctg
gaggtgagctggggggcagtggcaacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctaccgccacctcccccacacccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgccccggcagcagccgcacctgctgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgccaccgcgcccccgaccaccaccacc
atccaggtcttgccgacggtgcctggcagctcgatttccgtgcccactgcggccaggaca
caaggtgtccctgctgttctcaaagtgactggtcctcaggctacgacaggaaccccgttg
gtcaccatgcgacctgccagccaggctgggaaagcccctgtcaccgtgacctcccttcct
gcaggcgtgcgaatggtggtgcctacacagagcgcccaggggacggtcattggcagcagc
ccgcagatgagtggcatggctgccctggcggctgctgccgccgccacccagaagatccct
ccttcctcggcacccacagtactgagtgtcccagcgggcaccaccattgtcaaaaccgtg
gctgtgacacctggcactaccaccctcccggccactgtgaaggtggcctcctcgccggtc
atggtgagcaacccagccacacgcatgctgaagaccgcagccgcccaggtggggacgtct
gtctcctctgctgccaacacttccacccgccccatcatcacggttcacaagtcggggact
gtgacggtggcccagcaagcccaggtggtaaccacagttgtgggtggggtcaccaagacc
atcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttctaatctg
ggcaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtcacgggccag
gcatctacaggcccagtgactcagatcatccagaccaaagggcctttgccagctgggacc
atcctgaagctggtgacctcagcagacggcaagcccactaccatcatcactacgacgcag
gccagtggggcagggactaagcccaccatcctgggcatcagcagcgtgtcccccagcacc
accaagcccggcacgaccaccattattaagaccatccccatgtcggccatcatcacgcag
gcgggcgccacaggtgtgaccagcagtcctggcatcaagtcccccatcaccattatcacc
accaaggttatgacttctgggaccggagcacccgccaaaatcatcactgctgttcccaaa
attgccaccggccacgggcagcaaggagtgacccaggtggtgctaaagggggctcccgga
caaccaggcaccatcctccgcaccgtgcccatggggggcgttcgcctggtcacccccgtc
actgtctctgctgtcaaacctgctgtcaccacgttggttgtgaagggcaccacaggtgtc
acgaccctcggcacagtgaccggaaccgtctccaccagcctcgctggagcggggagccac
agcaccagcgcctccctggccacgcccatcaccaccttgggcaccatcgccaccctctca
agccaggtgatcaatcccactgccatcactgtgtcggcggcacagaccacactgacggca
gccggcgggctcaccacccccaccatcaccatgcagcccgtctcccagcctacccaggtg
actctgatcacggcgcccagtggggtcgaggcccagcctgtgcacgacctccctgtgtcc
attctggcctcacctacaacagaacagcccacggccacagtcaccattgccgactcaggc
cagggtgacgtgcagcccggcaccgtgacactggtgtgctccaacccgccctgtgagact
cacgagacgggcaccaccaacacggccaccaccaccgtcgtggctaatctgggggggcac
ccccagcccacccaggtgcaattcgtctgtgacagacaggaggcagctgcttctctcgtg
acctcaacagtggggcagcagaatggcagcgtggttcgtgtctgctccaacccgccgtgt
gagacccacgagacgggcaccaccaacacggccaccactgccacttccaacatggctgtg
cagcacagttgctccaacccgccgtgcgagacccacgagacgggcaccaccagcacggcc
accaccgccatgtcaagcattggtgctggccagcggcgggatgcccggcttgcctgtgca
gccagcaccgtccccactgtggtccgggtcagcgtggctgctggggtgtcagagggagcc
cagagtttggtcaaggccgcatgccaaacccgccagaccagtgcaaccagcaccaccatg
actgtgctggccactggggccccatgcccggccagcccgctcctcagaccgagcctggcg
ctagaggctggaggccacagtgccacgctcgtgcagctgggccctgtgagtgcccgtgtc
aggcccagtggccaggacagccctgtcaccggcctgggccagctggtgcccgtggggcgc
cagctggaggcgcatcacacccacacaaccaacagccccgccaccgcccactctaccgtg
ggtgccggcgagcccggcgaggcgcaggggacccccatgcttgtgtacgagggtgcaccc
agcgccactgtgactgcaacagccctggggtcgctgctgtgcccctctgccaccgtgacc
caagtctgctccaacccgccgtgcgagacccacgagacaggcaccaccaacacggccact
acctcgaatgcaggcagcgcccagagggtctgctccaacccaccgtgcgaaacccacgag
acaggcaccactcatacacccaccaccgccacctccagtgggggtgcgggccagccagag
ggtgggcagcagccccctgccagtcgcccctgtgagactcaccagaccacttccaccggt
actaccatgtcagtcagcgtgggcgccatgctccctgacaccaccccctcccacaggacc
ctagagtccagcttggaggtggtggcaccacccgctgtcaccccccaggtcggcgccgca
ttgctggctcctttcccgacacagagggtgtgctccaaccctccttgtgagacacacgag
acaggcaccacgcacacggccaccaccgtcacctccaacatgagctcaaaccaagatccc
ccaccgcctgccagcgaccagggagaggtggagagcacccagggtgatagtgtgaacatg
tccagttctggtcccatcacaacaacagtgtcctccacgctgacccgagctgtgaccact
gtgacacaatccactccggtcccaggcccttcggtgccgcccccagaggagctccaggcc
tcgccagggcctcgccagcagcttccgccgcggcaactcctgcagcccgcccccgcgcct
ctggtgggggcgtccgccgaggtcctgcccgcctctcaggcccctgagctccaggccgcc
gtggatctgagcagtacaggggacccgtcttcaggccaggagcctgccagctcagccgtg
gtggctactgtggtagtccagccacccccacccacacagtcggaagtagaccagttgtca
cttccccaagagctgatggccgaggcccaggcgggcaccaccaccctcatggtgacaggg
ctcacccctgaggagctggcggtgactgctgctgccgaagcagctgcccaggctgcagcc
acggaggaagcccaggccctggccatccaggcggtgctccaggccgcacagcaggccgtc
atgggcactggggagcccatggacacatctgaggcagcggccgcggtgacacaggccgag
ctgagccacctgtcggctgagggccaggagggccaggccaccaccatccccattgtgctg
acgcagcaggaactggccgccctggtgcagcagcagcagctccaagaggctcaagcccag
cagcagcagcaccacctccccactgaggccctggcccctgccgacagcctcaacgacccg
gctatcgagagcaactgcctcaacgagctggccggggctgtccccagcaccgtggccctg
ctgccctccacggccacggagagcctggctccgtccaacacgtttgtggccccccagcca
gttgtggtcgccagccctgcgaagctgcaggccgcggctaccctgaccgaagtggccaat
ggcatcgagtccctgggcgtaaagccagacctaccgcctccacccagcaaagcccctgtg
aagaaggagaaccagtggtttgacgtaggggtcattaagggcaccaatgtcatggtgaca
cactattttctgccaccagatgatgtagtccagtctgatgatgactcgggcaccgtccct
gactacaaccagctgaagaagcaggagttgcagccgggcactgcctataagttccgtgtc
gctgggatcaatgcctgtggccgggggcccttcagtgagatctcagcgtttaagacgtgt
ttgcctggcttcccaggggccccctgtgccattaaaatcagcaaaagtccggacggtgct
catctcacctgggagccgccctctgtgacctccggcaagattatcgagtactcggtgtac
ctggccatccagagctcacaggctgggggcgagcccaagagcgcgcccccagcccagctg
gcctttatgcgggtgtactgtgggcccagcccctcctgcctcgtgcagtcctccagcctc
tccaacgcccacattgactacactaccaagcctgccatcatcttccgcatcgccgcccgg
aatgagaagggctacggcccggccacccaagtcaggtggttgcaagaaaccagtaaagac
agctctggcgccaagccagccagcaagcggcccatgtcctctccggaaatgaaatctgct
ccaaagaaatctaaggcagatggtcagtga
DBGET
integrated database retrieval system
