Vicugna pacos (alpaca): 102545357
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Entry
102545357 CDS
T08098
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X10
KO
K06757
neurofascin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04514
Cell adhesion molecule (CAM) interaction
vpc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102545357 (NFASC)
04517 IgSF CAM signaling
102545357 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102545357 (NFASC)
Cell adhesion molecules [BR:
vpc04515
]
Immunoglobulin superfamily
L1 family
102545357 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
C2-set_2
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
102545357
NCBI-ProteinID:
XP_006215555
LinkDB
All DBs
Position
23
AA seq
1244 aa
AA seq
DB search
MAGQQPPPWVHAAFLFCLLSLSGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTTRGVA
ERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKA
LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA
NGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN
AFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHV
YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQ
LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQ
DLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITD
YVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERY
RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVT
VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLET
INLEWDHPEHPNGILTGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRADPVSRYRFSL
SARTQVGSGEAVTEESPAPPNEATPTAAPPTSPPTTVGATGTVSSTEATATAAATTEATT
VPTTPTVAPTTIATTTVATTTATTAATTTTTTTTTTESPPTTTRTKIQESAPDEQSIWNV
TVLPNSKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLR
VYSRDNEGVSSTAITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRG
GKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGE
GGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcagcagccgccgccctgggtccacgcagccttcctcttctgcctgctcagc
ctcagcggggccatcgagattcctatggatccaagcattcagaatgagctgtcccagccc
ccgaccatcaccaagcagtcagtgaaggaccacatcgtggatccccgtgataacatcttg
attgagtgtgaggccaaggggaaccctgcccccagcttccactggactcgcaacagcagg
ttcttcaacatcgccaaggacccccgcgtgtccatgaggaggcggtctgggacgctggtg
atcgacttccgcagcggcgggcggccagaggagtacgagggggagtaccagtgcttcgcc
cgcaacaagttcggcacggccctgtccaacaggatccgcctgcaggtgtccaaatctcca
ctgtggcccaaggaaaacctagaccctgtcgtggttcaagaaggcgctcccttgacgctc
cagtgcaaccccccacctggacttccgtccccagtcatcttctggatgagcagctccatg
gaacccatcacccaggacaagcgtgtctcgcagggccataacggagacctgtacttctct
aacgtgatgctgcaggacatgcagacggactacagctgcaacgcccgcttccacttcacc
cacaccatccagcagaagaacccgttcaacctcaaagtccttaccacccgaggagttgca
gaaagaacccccagcttcatgtatccccagggcactgcaagcagtcagatggtgctgcgt
ggcatggacctcctgctggagtgcatcgcctccggggtcccaacaccagacatcgcgtgg
tacaagaaggggggagacctcccatctgacaaggccaagtttgagaactttaacaaggct
ctgcggatcaccaacgtgtccgaggaagactctggggaatatttctgcctggcctccaac
aagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctactggctg
gacgaacccaagaaccttatcctggctcctggcgaggacgggagactggtgtgtcgagcc
aatgggaaccccaagcccaccgtccagtggatggtgaatggagaacctttgcaatcggca
ccacccaacccaaaccgcgaagtggccggggacaccatcatcttccgggacacccagatc
agcagcagggccgtgtaccagtgcaacacctccaacgagcacggctacctgctggccaac
gccttcgtcagcgtgctggacgtgccacctcggatgctctcagcccggaaccagctcatc
agggtgatcctgtacaaccggacgcggctggactgcccgttctttgggtctcccatcccc
acactccgatggtttaagaatgggcaaggaagcaacctggatggtggcaactaccacgtc
tacgagaatggcagtctggaaatcaagatgatccgcaaagaggaccaaggcatctacacc
tgtgttgccaccaacatcctgggcaaagctgagaaccaggtccgcctggaggtcaaagac
cccaccaggatctaccggatgcctgaggaccaggtcgccaaaaggggcaccacggtgcag
ctggagtgtcgcgtgaagcacgacccctcgctgaagctcacggtctcctggctgaaggat
gacgagccgctgtacattggaaacaggatgaagaaggaggaggactccctgaccatcttt
ggtgtggcagagcgcgaccagggcagttacacgtgtgtcgccagcaccgagctggaccaa
gacctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaaccgtttg
gcagccctgcccaaaggacggcctgaccgaccccgggacctggagctcactgacctggct
gagaggagtgtgaggctgacctggatcccgggggacgacaacaacagtccaatcacagac
tacgtcgtgcagtttgaagaggaccagttccagccaggggtctggcatgaccattccaag
ttcccgggcagtgtcaactcagccgtcctccagctgtccccgtatgtcaactaccagttc
cgggtcatcgccatcaatgaggtgggcagcagccaccccagcctcccgtccgagcgctac
cgaaccagcggagcaccccctgagtccaacccctctgatgtgaagggagaggggaccaga
aagaacaacatggaaatcacatggacgccaatgaatgccacctccgcctttggccccaac
ctgcgctacatcgtcaagtggcggcggagagagacccgagagacctggaacaatgtcacg
gtgtggggctcccgctacgtcgtggggcagacccccgtctacgtgccctacgagatccga
gtccaggccgagaatgactttgggaaaggtcctgagccagacactgtcatcggttactcc
ggggaagatttacccagtgcccccaggcgtttccgagtccggcagcccaacctggagaca
atcaacctggagtgggatcatccagaacaccccaatgggatcctgactggatatactctc
aaatacgtggcctttaatggaaccaaagtaggaaagcagatagtggaaaacttctctccc
aatcagaccaagttcacggtgcaaagagcagaccccgtgtcgcgctaccgcttttccctc
agtgccaggacgcaggtgggctctggggaagcagtcacagaggagtcaccggcgcctccg
aatgaagctactccgaccgcagctcctcccacgtcgcccccgaccacggtgggtgcgacc
ggcactgtgagcagtactgaggctactgccacggccgccgccaccaccgaagccaccaca
gtccccaccaccccaactgtcgcacctaccaccatcgccaccaccaccgtcgccacaact
actgcaaccactgccgccaccaccaccaccaccaccaccaccaccacggagagccctccc
accaccaccaggactaagatacaggaatccgcccccgacgagcagtccatatggaacgtc
acagtgctccccaacagtaaatgggccaacatcacctggaagcacaatttcgggcccgga
actgactttgtggttgagtacatcgacagcaaccatacgaaaaaaactgtccccgttaag
gcccaggcccagcccatacagctgacagacctctatcccgggatgacatacacgttgcga
gtttattcccgggacaacgagggcgtcagcagtaccgccatcacctttatgaccagcaca
gcttacaccaacaaccaggcggacatcgccacccagggctggttcatcgggcttatgtgt
gccatcgcactcctggtgctgatcctgctcatcgtctgtttcatcaagaggagtcgaggc
ggcaagtacccagtgcgagaaaagaaggatgttccccttggccccgaggaccccaaagaa
gaggatggatcctttgattacagtgatgaggacaacaagcccttgcagggcagccagaca
tccctggacggcaccatcaaacagcaagagagcgatgacagcctggtggactatggcgag
ggcggtgagggccagttcaacgaggacggctcctttatcggccagtacacagtcaagaag
gacaaggaggagacagagggcaacgagagctcggaggccacgtcgcctgtcaacgccatc
tattctctggcctaa
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