Vicugna pacos (alpaca): 102545387
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Entry
102545387 CDS
T08098
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102545387 (DDX43)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102545387 (DDX43)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102545387 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
KH_PNO1_2nd
KH-I_KHDC4-BBP
P-loop_SecA
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
102545387
NCBI-ProteinID:
XP_006204492
UniProt:
A0A6I9I5U5
LinkDB
All DBs
Position
18
AA seq
654 aa
AA seq
DB search
MSRQEAGANASSWVVASGRGEAVSRALERRSAEETNPRGRGGHRRGRVGGWRDPCGLQQP
GVAGCQEPPLSFRLKNDWVGAVIGRGGSKINEIQSTTSTKIQVIKGYPEAEVRIFGTKAM
QSKAKTVIDDLVKKQEEYKSERRVDVAAIQTSGGKDARKDVSRDQKLIDWDNLRENIWKW
SEKKWAGLPSIKKNFYVESETTSSMSQEQVDNWRKENYNITCDDLKDGEKRPIPNPTCTF
EDAFQCYPEVMKNIEKEGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIH
IDSQPVARNGPGMLVLTPTRELALQVEAECSKYSYKGLRSICIYGGGDRDGQIKDLSKGV
DIIIATPGRLNDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT
SATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESMSP
RDKVIVFVSRKAVADHLSSDLGIRHISVESLHGNREQSDRERALKNFKTGKVRILIATDL
ASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSDWKIASELINIL
ERANQSIPEDLRAMAERYKANKLKKKWKKKWHNSRGNPRSFIINIYVEKWYQST
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaggaagcaggcgccaacgcctcctcttgggtcgttgcttccgggcggggc
gaggcagtgtctcgggctctggaaaggaggtcggcggaggagacgaacccgagagggcga
ggaggccataggcgcggcagagtcggcggctggagggacccctgtggtcttcagcagcct
ggggtcgctggttgtcaggaaccgccgctgtccttcaggttgaagaacgactgggtcggc
gcggtgatcggccgtggtggatcaaaaataaatgagattcagagcacaacatccaccaaa
atacaggtaataaaagggtaccctgaggcagaagtaaggatttttggcaccaaggcaatg
cagagcaaagcgaaaacggtgatagatgatcttgttaaaaaacaagaagaatacaaatca
gaacgcagagttgatgttgctgctatccaaacttctggtggaaaagacgcaaggaaggat
gtttcaagagatcagaagttgattgattgggataacttgcgagaaaatatttggaaatgg
agcgaaaagaagtgggcaggtttaccttcaattaagaaaaacttttacgtggagtcagaa
acgacaagttcaatgtcacaggaacaggtagacaattggaggaaggaaaattataacata
acgtgtgacgacctgaaagacggggagaaacgtcctattcccaatccgacgtgtacattt
gaggatgcatttcagtgttaccccgaagttatgaaaaacattgaaaaggaaggttttcaa
aagccaacaccaattcagtcacaggcatggccaatcattctacaaggaatagatcttata
ggagtagcccaaaccggaacagggaagactttgtcctacttaatgcctggatttattcat
attgactcacagcctgtagccaggaatgggcccggcatgttagtccttacgcccactcgg
gagttagctttgcaagtggaagctgagtgttctaaatattcatacaaaggtcttagaagt
atttgtatatatggtggtggagatagagatggacaaataaaggacttatcgaaaggtgta
gatatcattattgccactcctggaaggctcaacgatctgcaaatgaataactttgtgtac
ctgaagagcataacctacctggtattagatgaagctgacaagatgctggatatgggattt
gaaccccagataatgaagattttactggatgtacgcccggacaggcagacagttatgaca
agcgcaacttggccatatgctgtccggagacttgcacaatcttatttgaaagagcccatg
attgtatatgttgggactttggatctagttgctgtaagtactgtgaagcaaaatataatt
gtcaccacagaagatgagaaacggtcgcacatccagactttcatagagagcatgtctcct
agagacaaagtcatcgtatttgttagccggaaagctgtcgctgaccatttgtcaagtgac
ctgggtatccgacacatatctgtagagtctctgcatggcaacagagaacagagcgatcga
gagagagcattaaaaaactttaaaacaggaaaagtgagaatactgatcgctactgattta
gcatctcgtggtctcgatgtccacgatatcacacatgtgtataattacgattttccccgc
aacatcgaagagtatgtgcacagagtggggcgcaccggaagagcagggaggactggggta
tctattacccttatcactagaagtgattggaagattgccagcgagttaattaatattctg
gaaagagcaaatcagagtatcccggaggatctcagagcgatggcggagagatacaaagcg
aacaaactaaaaaaaaaatggaaaaaaaaatggcacaactcccggggaaacccaagaagt
tttattattaatatctatgttgaaaagtggtatcagtctacttaa
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