Vicugna pacos (alpaca): 102545539
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Entry
102545539 CDS
T08098
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03250
Viral life cycle - HIV-1
vpc04623
Cytosolic DNA-sensing pathway
vpc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102545539 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102545539 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102545539 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102545539 (SAMHD1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102545539 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
102545539
NCBI-ProteinID:
XP_006202790
UniProt:
A0A6I9I534
LinkDB
All DBs
Position
19
AA seq
627 aa
AA seq
DB search
MQSAESQQPSKRPRCDSSPRTPPSTPPAAAERSPGPDLHPDHRTWGPEQVCCFLQRSGFS
DLGLLERCREKKITGSILPFLDESLLEDLGISSHAKRMKLLSYIQCLGQTHVNTMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGSGYYVFPGASHNRFEHSLGVGYLAGCLVR
ELSEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHEQGSVMM
FEHLVNSNGLRDVMQHYGLIPEEDICFIKEQITGPLDTPIKSPVWPYKGRPQEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNRKRICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIDTMITDAFLEADPHIQITGSEGEKYRISTAIDDMEAFT
KLTDNIFLEILYSTDPKLDAARAILKKIECRHLYKYVGETQPVGQVKIKKERYKRLPKEV
ADAKPSKILLEVELKAEDFIVDVINMDYGMEDKNPIDNVRFYCKSDPSKAIKITKDQVSQ
LLPERFAEQLIRVYCKKTDAESLFAAQQHFVHWCVINNFTKPQDGDVVAPLITPLKTEWN
CTDSAQSPARIQVVCKSGDQLFADNSM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcggagtcgcagcagccctccaagcggccccggtgcgatagcagccccagg
accccgccaagcacccctcctgcagcggcagagaggtccccgggccctgacctccacccc
gaccaccggacctggggcccggagcaggtgtgctgcttcctacagcgcagtggcttcagc
gatctcggactgctggaacgctgccgagagaagaaaatcacaggttcaatactgcccttt
cttgatgagtctcttcttgaagatcttggaataagttcccatgcgaagagaatgaagctg
cttagttatatccaatgcctaggtcaaactcatgtcaatacaatgaaggtgattaatgat
cctatccatggccacattgaactccaccctctcctcatccgaatcatcgacacacctcaa
tttcagcgcctgcgatatattaaacagttgggaagcggttactatgtttttccaggagct
tcacacaatcgatttgagcatagtctaggtgttgggtatctagctggatgtctagttcgt
gaactgagtgaaaaacaaccagagctgcagataagtgaacgagatatgctctgtgttcag
attgctgggctttgtcatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttattccacttgctcgcccagatgtgaaatggacgcatgaacagggctcagttatgatg
tttgagcacctagttaactctaatggactcagagatgtcatgcagcactatggtctcatc
cctgaagaagatatttgttttatcaaggaacaaattacaggaccacttgacacacccatc
aaaagtcctgtgtggccgtataaagggcgtcctcaagaaaaaagcttcctttatgagata
gtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattacaagcgctttattaagtttgcccgtgtc
tgtgaggtagacaataggaagcgtatttgtactagagaaaaggaggtcggaaacctgtat
gacatgttccacacacgcaactgtttgcaccgcagagcttatcaacacaaagttggcaat
atcattgatacgatgattacagatgccttcctcgaagcagaccctcacatacagataaca
ggttccgaaggagaaaagtatcgtatttctacagcaattgatgacatggaagcctttact
aagctgacagataacatttttctggagattttatactctactgatcccaaactggatgcc
gcacgagcaattttaaaaaaaattgaatgtcgtcatctatacaagtatgtgggtgagact
cagccagtaggacaagtaaagattaaaaaggaaagatacaaacgccttccaaaagaggtc
gccgatgctaaacccagtaagatattgctagaagttgaactgaaggctgaagatttcata
gtggatgttatcaacatggattatggaatggaagacaagaatcctattgataatgttcgc
ttctattgtaagagtgaccccagcaaggcaatcaagattactaaagatcaggtttcacag
cttttgccagagagatttgcagagcagctaatccgagtttactgtaagaagacagacgca
gagagtctgtttgctgcccagcagcactttgttcactggtgcgtcatcaacaacttcacc
aagccgcaggatggtgatgttgtagccccactcataacacctctaaaaacggagtggaat
tgcacagactcagcccagagtccagctcgcatccaagttgtatgcaaatccggagaccag
ctttttgcggacaactcgatgtga
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