Vicugna pacos (alpaca): 102545677
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Entry
102545677 CDS
T08098
Symbol
SOX9
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
102545677 (SOX9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102545677 (SOX9)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102545677 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Motif
Other DBs
NCBI-GeneID:
102545677
NCBI-ProteinID:
XP_031541528
LinkDB
All DBs
Position
16
AA seq
379 aa
AA seq
DB search
AAVVSGKQGGGRKGAVCEESKWWGSPSPPAELTAQPVSQSPSFSLRLPLPAPRLLNESEK
RPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAESEEASEQTHISPNAIFKALQADS
PHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLSEGGRQPPIDFR
DVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGXPATHGQVTYTGSYGISSTARPAARH
EWMSSSSAPPPXHARPHAQTTXXXXXXXDAPRHYSEQQQHSPQQIAYTPLPRPPATYHAP
PYPPITRSQYDYTDHQNSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIP
QTHSPQHWEQPVYTQLTRP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gctgctgtagtgtctggaaagcagggaggagggaggaaaggggctgtgtgcgaagaatcc
aagtggtggggatcaccttcccctcccgccgaactgacagcccagccggtttcacagagc
ccttctttttctctgcgcctcccccttcccgcccccagactgctgaatgagagcgagaag
cggcccttcgtggaggaggcggagcggctgcgcgtgcagcacaagaaggaccacccggat
tacaagtaccagccgcggcggaggaagtcggtgaagaacggccaggcggagtcagaggag
gcctccgagcagacgcacatctctcccaacgccatcttcaaggcgctgcaggccgactcg
ccgcactcctcctccggcatgagcgaggtgcactcccctggcgagcactcggggcaatcc
cagggtccaccgacgccacccaccacccccaaaaccgacgtgcagccgggcaaggctgac
ctgaagcgagaggggcgccccctgtcagagggcgggagacagccccccatcgacttccgc
gacgtggacatcggcgagctgagcagcgacgtcatctccaacatcgagaccttcgacgtg
aacgagtttgaccaatacctgccgcccaatggccacccggggngtccggccacgcacggc
caggtcacctacacgggcagctacggcatcagcagcacggcgcgacccgcggcgcggcac
gagtggatgtccagcagcagcgcgccgccgcccnngcacgcacgcccgcacgcccagacg
acnnnnnnnnnnnnnnnnnnnnctgacgccccacgccactacagcgagcagcagcagcac
tcgccgcagcagatcgcctacacgccccttccacgccctcccgccacctaccacgcccct
ccctacccgcccatcacccgctcgcagtacgactacacagaccaccagaactccggctcc
tactacagccacgcggcgggccagggctccggcctctactccaccttcacctacatgaac
ccggcgcagcggcccatgtacacgcccatcgccgacacctccggggtcccttccatcccg
caaacccacagcccccagcactgggaacagcccgtctatacgcagctcaccagaccttga
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integrated database retrieval system
