Vicugna pacos (alpaca): 102545729
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Entry
102545729 CDS
T08098
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102545729 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpc02000
]
102545729 (TMC3)
03037 Cilium and associated proteins [BR:
vpc03037
]
102545729 (TMC3)
Transporters [BR:
vpc02000
]
Other transporters
Pores ion channels [TC:
1
]
102545729 (TMC3)
Cilium and associated proteins [BR:
vpc03037
]
Other cilia and associated proteins
Stereociliary proteins
102545729 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
102545729
NCBI-ProteinID:
XP_006208868
UniProt:
A0A6I9IF60
LinkDB
All DBs
Position
27
AA seq
1096 aa
AA seq
DB search
MKPSKASQRYRSIRRNTSQHYFYQESLLLSTLDDSFTADDTGDSNDPEQIFQNIQFQKDL
MANIRCRPWTMGQKLRALRRAKDIVLKFEGRLTRTRGYQAAGAELWRKLARLACNFVVIF
IPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVIPELIAGQPFGSTASK
TIPTEHVASAQDLDTVWSLGGYLQYSVLFYGYYGKERRIGRAGYRLPLAYFLVGMAVFAY
SFIILLKKMAKNSRTSLASASSENYTFCWRVFCAWDYLIGNPEAAESKTAAIVNSIREAI
LEEQEKKKSKNLAVTICLRVVANILVLLSLAGSIYLIYFVVDRSQKLEQSKKELTLWEKN
EVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVDS
MSIEEAASQNSTSHWTDSATFATRAASEEDKWSTLGPGVGLRRNSTWALEEANVPTYTSP
LSGANKTTVSTQRPQDQCWETYVGQELLKLSIIDMLFTVASILLIDFFRGLFVRYLSDYW
CWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVL
TCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYKPSLNCGPFSGQEKIYDIV
SETINKDFPAWFGSVVGYVSSPVVILPAVLLLFMLIYYLQSIARSLKLSNHQLRMQIQNA
RSEDKKKVAQMVEARIQTQDESAKRLPKDSDLGSQLSSAHPATPQNNGNVVSFDSSSSKS
SRIETVTHPAPRSPRPGPGSATSPLPGFSKSRLEPSTTRYPRASTGELHRSRSCTPRTFT
KHMEDVYSEPLFQNDIQQINPPFPGSRVSDLMPHGRRSHAPRYYIVNERDSHQKNRSAFW
PERRFKVDAFEDTVEMYPRNTRQGVSRASRQPRSPQLSEEEGEVLRREVFEQAFHPRSLT
DLHGASHFYVGESLESRALTSEPQRWTHYKSWNDGFEGHLDRPMYVHRKPRSRNFQYPQH
PLKPRVKAKFEPSLTESDSMSAASSSDQQNSSADQYLQVTRSHGKFPRSAGQLGRTKALS
RQELTADLHDLVYSDV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcaaaggcatcccagcgttacagaagcatccggagaaacaccagccagcac
tacttctaccaggagtccctgctgctcagcaccttggatgacagttttaccgctgatgac
acaggggacagcaatgatccggagcaaatcttccagaatatacagttccagaaagatctc
atggcaaacattcgctgccgaccctggaccatgggacagaagctgagggcgctgagacga
gcgaaggacattgtgctgaagtttgaagggaggctgaccaggacccgaggctaccaagcg
gcaggcgcagagctgtggcggaagcttgctcgtctggcctgtaactttgtggtcatcttc
atcccctgggaaatgaggataaagaaaattgagagtcactttggatctggtgttgcctct
tatttcatattcttgagatggttatttggaattaatattgtgctcacgattatgacaggt
gctttcattgtcattccagagctcattgcaggccagccctttggaagcacagccagcaag
accatccccacggagcatgtggcatctgcccaagacttggacaccgtctggtccctgggg
ggttacctccagtactctgtcctcttctacggctactacggcaaggagaggaggatcggg
agagcgggctaccggctgcccttggcgtacttcctggtggggatggcagtgtttgcttac
agcttcatcattctcttaaaaaagatggctaagaactcccgcaccagcctcgccagcgcg
tccagtgaaaactacacgttctgctggcgggtgttctgtgcctgggattacctcattgga
aacccggaggcggcagagagcaaaaccgcggccattgtgaacagcatccgggaggctatt
ctggaagaacaggagaagaagaaaagcaaaaacctggcagtgaccatctgcctgagggtc
gttgccaacatcctggtgcttctctcgctggctgggagcatctatctcatctacttcgtg
gtggaccggtcccagaagctggagcagtccaaaaaggagctgacgctctgggaaaagaac
gaggtgagcgtggtggtctccctcgtcaccatgctggcaccatcagccttcgacctcatc
gccgccttggagatgtaccacccgcggaccacgctgcgcttccagctggcgagggtcctt
gtgttgtatctgggaaacctctacagtctgatcatcgccctcttggacaaagttgacagc
atgagcattgaggaagctgcttcccaaaatagcacaagtcactggacagattctgccacg
tttgccaccagggcagcctctgaagaagacaaatggtccacgcttgggcctggggtaggg
ctcaggagaaacagcacctgggctctggaagaggccaatgttccaacttacacctcacct
ctctcaggggccaacaagaccaccgtctccacccagcgtccgcaagaccagtgctgggag
acctacgttgggcaggagctgctgaagctctccatcatcgacatgctcttcaccgtggcc
agcattctgctcatagacttcttccgaggacttttcgttcggtacttaagtgactactgg
tgttgggacctggaaagcaagtttcccgaatacggagaattcaaaatagcagagaatgtg
ttacacttagtctacaaccaaggaatgatttggatgggggccttcttctccccctgtctc
cctgcgttcaacgtgctcaagctgatagggctcatgtacctgcggagctgggctgtgctg
acctgcaacgtaccccaccagcaagtcttccgcgcctccagatccaacaacttctacctg
gcgatgctcctattcatgctcttcctgtgcatgctgccaaccatttttgctattgtgcgc
tacaagccctctctaaactgcgggccattcagcggccaagaaaaaatttatgacatcgtg
tcagagacgatcaacaaggactttcccgcgtggtttggctctgtggtggggtacgtcagc
agccctgtggtcatcctgccggccgtgctgctgctcttcatgctcatctattaccttcag
agcatcgcaaggtccttgaagctcagcaaccaccagctcagaatgcagatccaaaacgca
agatctgaagataagaaaaaggttgcccaaatggtagaagctcgcatccaaacccaagac
gagagcgccaagaggcttccaaaggacagcgatctcggcagccagctgtcctccgctcac
ccggcgactccccagaacaacggcaatgtggtcagtttcgactcatcaagcagcaagagt
agcaggatagagaccgtcacccaccccgcgccccggagtccccggccagggcccggcagt
gccacctcgcccctccctggcttctccaagtccaggctggagcccagcactaccaggtat
ccacgtgcaagcacaggtgagcttcacaggagcagatcctgcacacctaggacgtttaca
aagcacatggaagatgtttactcagagcctcttttccaaaatgacattcagcaaattaac
cctccttttcctggatcccgggtctcggacttgatgccccatggtcgcaggtcccacgcc
cccagatactatatcgttaatgaacgtgactctcaccaaaaaaaccgttcagctttctgg
cccgaaagacgcttcaaggtagatgcttttgaggacacagtggagatgtaccccaggaac
acacgacagggcgtgtcccgggcctcccgccagcctcgctctccacagctaagtgaagaa
gagggtgaggttctgaggagagaggtgttcgagcaggctttccacccacgctccctgacc
gacctccacggggcttctcatttttatgtgggcgaaagtttagaaagccgggccctgacc
tccgagccccagagatggacacattacaagtcttggaatgatggtttcgagggccatctt
gacaggccgatgtacgtgcacagaaagccacgctcccggaatttccagtacccacagcac
cctctgaagcccagagttaaggccaagttcgagccgtccctcacagaatccgactccatg
tcagcggcgtccagcagtgaccagcagaacagcagcgctgaccagtacctccaggtcacc
cgcagccacggcaagttcccgaggtccgcgggccagctcggcaggacgaaggccctatct
cggcaggagctgaccgcggatctgcacgacctggtttattcagacgtctag
DBGET
integrated database retrieval system
