Vicugna pacos (alpaca): 102545923 Help Entry 102545923         CDS       T08098                                  Symbol RTTN Name (RefSeq) LOW QUALITY PROTEIN: rotatin   KO K16484   rotatin Organism vpc  Vicugna pacos (alpaca) Brite KEGG Orthology (KO) [BR:vpc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:vpc03037]     102545923 (RTTN) Cilium and associated proteins [BR:vpc03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    102545923 (RTTN) SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Arm_2 Phage_T3_1_05 Motif Other DBs NCBI-GeneID:  102545923 NCBI-ProteinID:  XP_031530230 LinkDB All DBs Position Unknown AA seq 2234 aa AA seqDB search MEPDGMVLAGLIRKLGHQLAEIRERALKNILCKIEHNLICCADLVQERLLFLHLLEWFSF PSVPMKEEVLSLLNRLVKYPPAVQHLIDLGAVEFLSKLRSNVEPNLQAEIDGVLDGLFIL PSEVPELYSASYQTSQTELPQQPETLTGYFPQDKSNFQQMEEPLRPMAHRTVKCLKFSTF PWLPLTTADRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLS LLKLAFGGDGKHRLALQAVSCLQQLCMCLRNRLNFHRDPNFFSSKQDTVSQNSSLSYCQE ARVPHHSQNPSPGGSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSGHAHVNSRLSVHSAL DVAHLDLPELEAADALELWFRQLSLPQFCVSILESAVPLLRTGSRQVVIRVLELLAEDLV LTGEAISADVWDDSSLFAIDMKEKLLVVLGSLGDTMCYHKSSVSLEQPEAVLVHHRMAFV GISLFAVRLLQTLLPAEKASHFLPEPMSAALFLVSLDMPISLEYPNIHEAVVAYLEQLNS ENYSIYKRTAEAVYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHFPLIKEI MCICSNIWKSAQASPLLQGESQKVFLRMLSHPLLQVKVKTYHCCLEIIKECLGVHNVSQP VSSLCNGIHFLLHPKVLYEICAFGMQEPKNEVNAAAKAVLTYLLQGRLMMTALTWNKFIE ALCPVIPVLQGYADTEDPLGNCILLLSKASSEAGEGILPCTTRLKSILRLLLVRKPSVRA LALKLLACYLTREEGAGTKRPSIDARVLSRVTNLFIVKKPIELKLDDRKELIIKLETVEK VYEIFISDDIDLVLRKSAAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNECVGQDGEVIE CLIQPSLTLLRKVLCADPVLRVSLSQQSSLLTLLLRVSLIFHEDCTVVTEVGALFCLLLF DEVSRMDMWSDNPSSKPSSPSVFSLPVSVFRRYHLPVHALGHHAVSPYSMVLPLSADCLA LKPVSDMLRMAWNLSWYHGSDNLLKQMNSETKIHEFLDTLKLSTEDTLTLRMTHTASGLK DCLHSIVQAAAHREARAAVTRMSFYLLNDRLSFKDGTGPCGITLKSLSWHTTLNRFLQVL PACTEDEKLLIDIIHFLNKLLKEQRKYVSTELLNWLLELLLRHSPNPLFDLLVLTESQSR EEADAIRTAVRQQLQKELMALFNTLLLSFGAVADRKCLELFYVFQTQLALKLLQCLRVTD APHFYGLPSLERTLRGMAHLTAFPGWSSHSPLTKPLEICVKYLSGLLEVITSFYVERGGN AMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSEWMSLWFLPLGSQGEEHAPTQQGLAWLIP LWVDRDPEVRFTSLGLGSALTTLAAGCVALASSCQNISGGLWGTVVSILLDQSECSMVRR EAAFILQNLLVIPMPSVIIKDYTWQGPCVHDEDSGLSLTGKPALQALLYHCHFYEHLSQM VKHCYLGRYTFDLNCSALHGTSEGNDLNGLDDSFKFWRAPSRMSNQDQDPSSLSTSETTV AASLGSAEFQPHMLCAAPLPEASHDQFVAQGQHETASPRPPQDSSLSAPLPRQCVFVTPP LLSAVCSLLDSLLATTPGDTADALRQARLMELLCGXETTLLERKQTQAFTFATVVLRVFE HTQAQVSFLLEYLSSLSRLLQSCLLVDPDLLVQDELLKSLITNVIRVLTIYIKDVLDAEL ISAFYQTWTHLFNLLATLLRKAGPASLPSITMGLARHWAAVIDTFCTCVGLSTTCPPLYT ASLQFLSILLTEEAKRHLQDKDKTSLRHSPTLASLLDETQENQASVERLNEVILQSYEGK SSKDTLRRVAANALLSLLAISRRAQKLALRASLVDGCIEQMKHIHAQLNLDCLRPGKAAL KRKDDGFIKELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHALWPWLLMDDSLMQIALQ LLCVYTANFPSGCSSLCWSSYGQHPAQAAHRGAAGSSLMLCILKLASQVPLENAAVQQMV FMFLSNLALSHDCKGVIQKNNFLQNFLSLTLPKGGSKHLSNLTVLWLKLLLNMSFGEDGQ QMILRLDGCLDLLTEMSRYKHKSSPYVPLLIFHNICFSPANKPKILANEKIISVLAACLE SENQNAQRIGAAALWALIHNYQKAKTTLKNPSIKRRVDEAYSIAKKTFSDSEETPLNTYY LKCLENLVQQLNSS NT seq 6705 nt NT seq  +upstreamnt  +downstreamnt atggagccggacgggatggtcctggcggggctcatccggaaactcggtcatcagctggcc gagatcagggaacgcgctctcaagaatattctctgcaagattgagcacaatttaatctgc tgtgctgatctagttcaggagaggctactttttctccatttgctggaatggttcagtttc ccgtctgttccaatgaaagaagaggttctgagccttttgaacagattggttaagtatccc ccagcagtccagcatttgatcgatcttggtgcagtcgaattcttatctaaacttcgttct aatgtggagccgaatctacaggctgaaattgatggcgttctagatggactttttattctt ccctcggaagttcctgaactttattctgcatcttaccaaaccagtcaaactgaattgcca caacaacctgaaaccttaacagggtattttcctcaggacaaaagtaatttccagcagatg gaggagcctctacgacccatggcacaccggactgtgaagtgtttgaagttctccaccttc ccttggctccccctgaccacagccgacaggcatgttctctcctccaatgaaagctcttta agaagtagtaaccacactttaatctggaacacctgtgagctattgaaagatgttatcatg caagattttcctgcggagattttccttcagaggccaaaaattgttcagagccttttatct ctgttgaaactggcctttggaggagacggaaaacatcgcctggcattacaggcagtgtcc tgcctgcagcagctgtgcatgtgtttaagaaacagacttaactttcaccgagatccaaat ttcttctctagtaaacaggatacagtttcccaaaattcttctttgtcttattgtcaagaa gcaagagttcctcatcactcccagaacccttctcccggaggcagcagccctcggccttcc gtggttggacgcacaggccagcggcccagaggagacggccaggactgggacgcagtgtcc tctagcggaagcagcggccacgcccacgtcaactccaggctgtctgtccactccgcgctg gacgtggcgcacctggacctgccggagctggaggccgccgacgcgcttgagctgtggttc cggcagctcagtctgccccagttctgcgtctccattctggagtcggccgttccgctctta agaacaggtagtaggcaggtggtgatacgggttctggagctgcttgccgaggacctggtg ctgaccggtgaagcgatttcagcagacgtctgggatgacagcagcctttttgccatagat atgaaagagaaactgctcgtggtgctggggtcccttggagacaccatgtgctaccataaa agcagcgtcagtttggaacagccagaggccgtgctggtgcaccacagaatggcctttgtt ggcatctcgctgtttgcagtccgactgctgcagacacttctccctgctgaaaaggcaagc cactttttaccggagcccatgtcagcagcattatttctagtttctttggacatgcctatt tctttggaatatccaaatattcatgaggctgttgtggcctatttggaacagctgaattct gaaaactacagtatctataaacgaactgcagaggctgtttattcaattgaatgtacctgt aacttcctgtctgatgttggaaaggagggagagaagaatctcttggaattagtggagttg gcagaccaagccttacgtagcttttcctatcatcagcatttccccctaataaaggaaatc atgtgcatttgttcaaacatctggaagtccgcacaggccagtccattactgcaaggagaa agccagaaggtgtttctgcgtatgttgtctcacccattgctacaagtgaaagttaaaact taccactgctgcctggaaattattaaggaatgtctaggtgtccacaatgtcagtcaacct gtgtcttcactttgtaatggaattcattttctacttcacccaaaagttctgtacgaaatc tgtgcatttggcatgcaagagcccaaaaatgaggtgaacgctgctgccaaggccgtcctg acgtacctgctgcagggacgactgatgatgacagcgctgacctggaacaagtttattgag gccctctgtcctgtcatcccagtcctgcagggctatgcggacacagaagaccctttgggt aactgcattctcctcctaagcaaagcgagttctgaggcaggcgaagggattctcccctgc accacccggttgaagtccatattgcgactcctgctggtgagaaagccttcggtccgggca ctggcgttgaagctgttagcttgttacctcacgagggaagagggggccggtaccaagcgc ccttcaatagatgccagagttctctccagagttactaatttatttattgtgaaaaaacct attgaactcaaactggatgacagaaaagaactgattattaagttggagactgttgaaaag gtctatgaaatctttatctcagatgatattgatcttgttttgagaaagtcagctgcagag cagttagctgtgatcatgcaagatattaaaatgcatgctgtggtgaaaaaattatgctta atcgacaagataattgagtacttaaatgaatgtgtgggtcaggatggtgaggtcatagaa tgtttaatacagccgagcctcacgctcctgaggaaggtgctttgtgccgacccggtcttg cgtgtgtccctctcacaacagtcttctctcttgactttgttgctcagagtttccttgata tttcatgaagattgtactgtcgtgactgaagttggagcattattttgccttctgttattt gatgaggtatcaagaatggatatgtggtctgataatccttctagtaaaccttcgtcacca tcagtcttcagcttgcctgtttcagtttttagaaggtatcatctgccagtacatgcgctt ggccaccatgctgtgagtccttactccatggttttgccgctgtctgctgattgtttggcc ctgaagccagtctcagatatgctgagaatggcttggaacctatcatggtatcatgggagt gataatctgctgaagcaaatgaactctgaaaccaaaatccacgaatttttagatacactg aagttatccaccgaggacacccttactctgaggatgacacacactgctagtggactgaag gactgtctccactccatcgtccaggctgccgcccacagggaggcgagggctgctgtcaca aggatgagtttttatcttctgaatgacaggttgtctttcaaggatggcactggcccatgt gggattaccctgaagtccttgtcttggcacaccacactgaacaggtttttacaagtgctt cctgcttgcactgaagacgagaaacttctgatagatatcatacattttttaaataagtta ttgaaggaacaaaggaaatatgtatccacggaacttctgaactggctgctagaattactt ctgagacatagtccaaacccactgtttgacctgctggttctaacggagtcgcagtcgcga gaggaagcggatgccatccgcaccgctgtccggcagcagctccagaaagagctgatggct cttttcaataccttgctgctcagtttcggggcagttgctgacaggaaatgcctggaactc ttttacgttttccaaacgcagctggctctgaaactgctccagtgcctgagagtcacggat gcgcctcatttctacggcctgccgtccctcgagaggaccttacgagggatggcccacctc acagcatttccaggatggagctcacactctcctcttacaaagcccctcgagatctgtgtg aagtacttatcgggtctcctcgaagtcattacttctttttatgtggagcgtggaggaaac gccatgtccttcatgggaaaaggtgtcacaaagagcacggtcctttgcttgcttcacttg tcccacgagatgatggcgcaggcccagagctcggagtggatgtcactttggttcttgcct ctgggtagtcagggcgaggaacatgcccccacccagcaaggcctggcatggttgattccg ttgtgggttgaccgagacccagaggtgaggttcacttcgctgggattgggatcagcactg accacccttgcagctggctgtgtggccctggccagcagttgtcagaacatctctggtgga ctctgggggacggtggtgagcattctcctggaccagtcggaatgcagcatggtgcgccgg gaggctgcatttattcttcagaatctccttgtaattccaatgccctcagtaattataaag gattatacttggcagggcccctgtgtccatgacgaggactctggcctgtcgctcacagga aaacctgcccttcaggctctgttatatcactgccatttttatgaacatttgagtcagatg gttaaacattgttacctgggacggtatacatttgatttgaattgttctgctcttcatgga acttcagaaggcaatgatttaaatggtttagacgactcattcaagttctggagggcacca tctcggatgtccaatcaagatcaagatccaagttctctctccacctcggaaacaacggtg gcagcttcgttggggagtgctgaatttcagccacacatgctctgcgcagcgcctctccct gaagcctcgcacgaccagtttgtggctcaaggtcagcatgaaactgcatctccgcggcct cctcaggattcctccctttctgctcctctgcccagacagtgtgtttttgtcactccgcct ctcctctcggccgtatgcagtctcctggacagcctcctggcgaccactccaggtgacact gcggacgctttgcggcaggctcgcctcatggagcttctctgtgggtaagagaccacgctc ctggaaaggaagcagacccaggccttcacttttgccacagttgtcttgagagtcttcgaa cacactcaggctcaggtgtcctttctcctagaatacctgtcttctttgtcgcggcttctg cagtcatgtttactggtagatcctgacctcctggttcaggacgagcttctgaaatctctg atcacaaacgtcatcagagtgctcaccatatacatcaaagatgtgctagatgcagagtta atatcggccttttatcagacatggacacatttatttaaccttctggccacactcctgagg aaagctggtcctgcctctttaccatctattacaatgggcctggccaggcactgggcagcg gtgatcgatacgttctgcacatgtgtgggtttgtctaccacgtgccctcccctgtatacg gccagcctgcagttcctgtccatcctcttgactgaagaagcaaaaaggcatctccaggat aaggataaaactagtttacgccacagtccaacgctggcttcacttctggatgaaacgcag gagaaccaggcatctgtagaacgacttaatgaagtaattcttcagagctatgaaggaaaa tcttccaaagataccctgagaagagtcgctgcgaacgcattgctgtcgcttctggccatc agcagaagagcacagaagctcgcgctgagagccagcctggtggacggctgcatagagcag atgaagcacattcacgcgcagctgaacctggattgtctgaggcctgggaaggccgcgctc aagagaaaggatgatggttttattaaagagttaagcattgccatgcagctcctgagaaac tgcctttatcaaaatgaagaatgtaaagaagcggctctggaggcccacctggtcccggtc ctgcacgctctctggccttggctcctgatggacgattcactgatgcagatcgccctgcag ctgctttgtgtctacactgcaaattttccaagcggctgcagctctctctgttggtccagt tatggacaacatcctgctcaagctgcacatcgaggagccgccggcagctccctgatgctg tgtatcctgaagctggcttcccaggtgcctctggagaacgctgcagtccagcagatggtt ttcatgtttctttcaaacctggccttgtctcatgactgtaaaggggtgattcaaaaaaat aacttcttacagaactttctctctctcacattgccaaagggaggaagtaaacatctcagc aatctgaccgttctctggttgaagttactcctgaatatgtcatttggagaagatgggcag caaatgatcctgaggctggacggctgtttggacttactgacggagatgagcagatacaag cataagagcagcccttacgtgcctcttctgatttttcataacatttgcttcagtcctgcg aataagcccaagatcctggctaatgaaaaaatcattagtgtgctagctgcctgtctggaa agtgaaaatcaaaatgctcagaggattggagcagctgcgctttgggctctgattcacaat taccaaaaggcaaaaacaactttgaaaaatccatcaataaaaagaagagtggatgaagca tattccatagcaaagaaaactttctcagactcagaagaaactcctctaaacacctattat ttgaaatgtcttgaaaacctcgtgcagcaactcaactcttcatga

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